Detail



ID : Ahg474170

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474170|fgenesh2_kg.1__4124__AT1G50430.1
Sequence
GTTCATCGTT AACTTCGCAG ACTCTGTTGG GATTAGTCAA CACAGATCAG AATCTGAGCT TTTGGCCGAG ACAAGCGAAG AAGAAGAAGA AGAAGATGGC GGAGACTGTA CATTCTCCGA TCGTTACTTA CGCATCGATG TTATCGCTTC TCGCTTTCTG TCCACCTTTC GTCATTCTCC TATGGTACAC AATGGTTCAT CAGGATGGTT CTGTTACTCA GACCTTTGGC TTCTTTTGGG AAAATGGAGT TCAAGGACTC CTCAACATTT GGCCAAGACC CACTTTGATT GCTTGGAAAA TTATATTTTG CTATGGAGCA TTTGAAGCTG CTCTTCAGCT ACTTCTGCCT GGTAAAAGAG TTGAGGGTCC GATATCTCCA GCCGGAAACC GACCAGTTTA TAAGGCCAAT GGTGTGGCTG CTTACTTTGT GACACTAGCT ACCTATCTTG GTCTTTGGTG GTTTGGGATC TTCAACCCTG CAATTGTCTA TGATCACTTG GGTGAAATAT TTTCGGCACT AATATTTGGA AGCCTCATAT TTTGTGTTTT GTTGTACATA AAAGGCCATG TTGCACCTTC ATCAAATGAC TCTGGTTCAT GTGGTAACCT AATAATTGAC TTCTATTGGG GCATGGAGTT GTACCCTCGA ATTGGTAAGA ACTTTGACAT CAAGGTGTTT ACTAACTGCA GATTCGGAAT GATGTCTTGG GCAGTTCTTG CAGTCACGTA CTGCATAAAA CAGTATGAAA TAAATGGCAA AGTATCTGAT TCAATGCTGG TGAACACCAT CTTGATGCTG GTGTATGTCA CAAAATTCTT CTGGTGGGAA GCTGGTTATT GGAACACCAT GGACATTGCA CATGACCGAG CTGGCTTCTA TATATGCTGG GGTTGTCTAG TGTGGGTGCC TTCTGTGTAC ACTTCTCCAG GCATGTACCT TGTGAACCAC CCCGTCGAAC TTGGAACTCA GTTGGCAATA TACATTCTAG TTGCAGGAAT TCTCTGCATA TACATAAACT ATGACTGTGA TAGACAAAGG CAAGAGTTCA GGAGGACAAA CGGGAAATGT TTGGTTTGGG GCAGAGCGCC GTCAAAGATT GTGGCGTCGT ATACTACAAC ATCTGGTGAA ACTAAAACTA GTCTTCTCTT AACGTCTGGA TGGTGGGGTT TGGCTCGTCA TTTCCATTAT GTTCCTGAGA TCTTAAGTGC TTTCTTCTGG ACTGTACCGG CTCTCTTCGA TAATTTCTTG GCATACTTCT ACGTCATATT TCTCACCATT CTTCTCTTCG ATCGAGCCAA GAGAGACGAT GACCGATGCC GATCAAAGTA TGGGAAATAT TGGAAGCTGT ACTGTGAGAA AGTCAAATAC AGGATCATTC CGGGGATTTA TTGATTGTAA CGAAGTCTGT TTTTCTCTTT TTTTAATTTG AACGTTGGAA TCATCAAAAG ACCGAGAAAA GCAAAATTGA TACGTTAGAC ATTATTTTGC TGATTTGTAT GCTATAGGTT TTGAAATCTC TAGTTACGCT TATGTATTTC CCTAGATTAT TTAAATTTAG CCTGCCGTTT TAATTTTTAT ATTTGATATT TTGATTATAC 
Length1600
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25113037.. 25116826
Download Sequence
A.thaliana
AGI-codeAT1G50430.1
DescriptionErgosterol biosynthesis ERG4/ERG24 family
TAIR curator summaryMutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype.
Alias[7RED][DWF5][LE][PA][ST7R][DELTA5,7-STEROL DELTA7 REDUCTASE][DWARF 5][LEPIDA][PARVA][STEROL DELTA7 REDUCTASE]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg483931 fumarase 1
3.16228 Ahg483117 appr-1-p processing enzyme family protein
4.24264 Ahg480677 VPS35 homolog A
5.47723 Ahg339044 ZIP metal ion transporter family
9.74679 Ahg945213 NAD(P)H dehydrogenase B1
12.2474 Ahg470606 cell division cycle protein 48-related / CDC48-related
12.3693 Ahg491217 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative
14.6969 Ahg476765 Prolyl oligopeptidase family protein
18.4932 Ahg486610 Protein of unknown function (DUF3245)
19.799 Ahg928254 P4H isoform 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression