Detail



ID : Ahg470987

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470987|fgenesh2_kg.1__941__AT1G09060.2
Sequence
TCTCCCATCT ATCTTCTCTG CAATTTCTCT CGTGCAAAAC CCTAATTTCA GGTTTTGGGT TTTCCTTCTT TCACTGTCAA TTTTGATGAG ATTTGTGATT CAGTGATTAG AATGAGTGCT CATGAGCTAA CTCGATCCGC CAATGGCAAT GGTGAGTCTA TTCTCGGGAT TCCAGATGAT TTACGGTGCA AGAGATCGGA TGGTAAACAG TGGAGATGCA CTGCAATGTC CATGGCTGAT AAGACCGTGT GTGAGAAGCA CTACATCCAA GCAAAGAAAC GGGCAGCTAA TTCGGCTTTC AGGGCGAACC AGAAGAAAGC GAAACGGAGA TCATCATTAG GCGAAACAGA TACATATTCG GAAGGGAAGA TTGATGATTT TGATTTACCA GTCACCAGCA TTGACCACTA TAATAACGGT CTTGCCTCTG CTTCCAAGAA CAATGGTAGA ATAGACAAGA GACATAATAA AAGCCTGATG CGGTACTCAC CGGAGACACC GATGATGAGG GGTTTCTCTC CACGTGTTGC AGTGGATTTG AACGATGACT TGGGTAGAGA TGTTGTAATG TTTGAAGAGG GCTACAGATC GTATAGGACA CCACCATCTG TTGCTGTAAT GGATCCATCA CGCAACAGAT CACACCAAAG CACGAGTCCT ATGGAATACT CAGCAGCAAG CACAGATGTG TCTGCAGAGT CTTTGGGGGA AATCTGCCAT CAATGCCAGA GAAAAGATAG AGAGAGAATC ATTTCTTGCC TTAAATGCAA TCAAAAAGCC TTCTGCGAAA ATTGTATATC GACAAGGTAC TCGGAGATAT CACTTGAAGA AGTTGAGAAA GTTTGCCCTG CATGTCGTGG TTTGTGTGAT TGCAAATCTT GCCTGCGTTC TGATAATACA ATAAAGGTTC GGATCCGGGA AAAACCCGTT TTGGAAAAGT TGCAGTATCT TTATCGTCTA TTATCAGCTG TCCTTCCAGT GATAAAGCAG ATCCATCTTG AACAATTTGA ACTAGAGAAG AGGCTTCGTG GAGCTGAGAT TGATCTTGTC AGGGCAAGAT TGAAAGCAGA TGAGCAGATG TGCTGCAACT TGTGTCGGAT ACCAGTTGTT GACTACTACC GTCATTGTCC GAACTGCTCA TATGACCTTT GCCTCAGATG CTGTCAAGAT CTACGGGAAG AGTCTTCAGT TAAGATTTGT GGGACTAACC AAAACATAAG AGAAAGTAAA GGAGCTCCTA AACTAAAACT AAACTTTTCA TACAAGTTTC CTGAGTGGGA AGCCAACGGT GATGGGAGCA TCCCTTGCCC TCCTATTGAG TATGGAGGCT GCGGTTCCTG TTCTTTGAAT CTCGCTCGCA TTTTCAAGAT GAATTGGGTC GCAAAGCTTG TGAAAAATGC TGAGGAGATT GTTAATGGCT GCAAATTATC TGATCTTCGG AACCCTGATA TGTGTGATTC CAGTTTCTGC AAATTTGCTG AGAGAGAAGA GAGCGGTGAC AACTACGTGT ACAGCCCGTC GCTTGAAACG ATTAAAACTG ATGGAGTAGC TAATTTAGAG CAACAATGGG CAGAGGGTAG GCTTGTTACT GTGAAAAGGG TACTTGACGA CTCATCTTGG TCTAGATGGG ATCCTGAGAC TATTTGGAGG GATATAGACG AGCTTTCAGT CGAGAAACTG AGAGAACATG ATCCATTCTT GAAGGCCATT AATTGCGTGG ATGGTTCAGA GGTTGATGTA AGACTTGAGG AATTTACAAA AGCATATAAA GATGGTAAAA ACCAAGAGAC AGGTCTTCCA CTACTATGGA AGTTAAAGGA CTGGCCATGC CCAAGTGCTT CTGAGGAATT CATTTTCTAT CAAAGACCTG AGTTTATCAG AAGTTTTCCG TTTCTAGAGT ACATCCATCC CCGGTTAGGC CTTCTGAATG TTGCAGCCAA GTTACCTCAT TACTCCCTCC AAAACGATGC TGGTCCAAAG ATTTATGTGT CTTGTGGGAC GTACCAAGAA ATTGGTACTG GCGATTCATT GACTAGTATT CACTACAACA TGCGTGACAT GGTATACCTC TTGGTGCACA CATCTGAAGA AACAACATTT GAAAAGGTGA GAGAAACGAA ACCTGGTCCA GATGAACCCG ACCAGAAGAT GAGCGAAAAT GAGTCACTTC TTAACCCTGA GGAAAAATTA AGGGATGGAG AGTTACATGA TCTATCACTT GATGAAGCCA ATATGGAGAA GAATGAACCT GAGTTGGCGT TGACTATGAA TCCAGAGAAC TTAACAGAAA ACGGCCACAA CATGGAATCT TATTGCACAT CTTCATGTGC AGGAGGAGCC CAGTGGGATG TCTTTCGACG GCAAGACGTC CCAAAGCTGG CCGAGTATTT GCAGAGAACA TTCCAGAAGC CTGATAATAG CCAGACTGAT TTTGTGTCAC GCCCGTTGTA TGAAGGATTG TTCTTAAATG AACACCACAA GAGACAACTA AGAGACGAGT TTGGAGTTGA GCCATGGACA TTTGAGCAAC ATCGGGGTGA GGCTATCTTC ATTCCGGCTG GATGTCCGTT CCAAATCAAG AATCTTAAGT CGAATATTCA GGTGGCACTT GACTTCTTGT GCCCTGAAAG CGTTGGAGAG TCAGTAAGAC TAGCTGAAGA AATCCGGTGT TTACCAAACG ACCACGAGGC AAAACTTCAG ATTCTAGAGA TTGGAAAGAT ATCGTTATAC GCAGCTAGCT CAGCCATTAA AGAGGTTCAG AAACTGGTCT TGGATCCAAA TTTTGGAGCA GAGCTTGGTT TTGAGGACTC TAACTTAACC AAAGCAGTCT CTCACAACTT AAACAAGGCA ACCAAGCGGC CGCAGCAAAT GAGTTGCACT TAATCAGTCA AGATTTGTAT AGTAGTATAA AAATCATTGT TGTGACTTTA GTTTAGACTA CTATTCAGGA TTTGTAATGT ATCTATGACT CTGTGTATAT CATGCTTCAT AAAGTATATT CATAACCATC ATTATTCCAC ATAATTTTT 
Length3029
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3285693.. 3290393
Download Sequence
A.thaliana
AGI-codeAT1G09060.3
DescriptionZinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg488686 Protein kinase family protein
3 Ahg339115 tRNA arginine adenosine deaminase
10.0995 Ahg491441 RING/FYVE/PHD zinc finger superfamily protein
11.3137 Ahg488545 binding partner of acd11 1
18.1659 Ahg480870 ATP citrate lyase (ACL) family protein
19.5448 Ahg488536 SART-1 family
24.7992 Ahg475472 alpha-1 tubulin
27.4955 Ahg475241 U2 snRNP auxilliary factor, large subunit, splicing factor
34.5543 Ahg494576 Homeodomain-like transcriptional regulator
35.2136 Ahg494461 Cyclin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression