Detail



ID : Ahg471340

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471340|fgenesh2_kg.1__1294__AT1G11910.1
Sequence
ATCTCTCCTC ACAGTGATCT CTTTCTTCCC AAATAAATGT AAACTATCTC TCGTCTCGTT TTCTTCCACA ATCCTCATTT CTCTGAGAAT CTGGTGCTTA GCTTTTGTAA AATGAAGATT TACTCTACAA CGGTTGCTGT TGCACTCATT GTGTCATTCC TACTGTTTTT CTCTGCCTTT TCTGAGCGCA ATGACGGGAC CTTCAGAGTT GGCCTCAAAA AACTCAAGTT GGATTCCAAA AACCGGCTTG CAGCACGCGT CGAATCCAGG CAAGATAAGC CCCTGAGAGC TTACAGCCTT GGAAATTCTG AAGATGCTGA TGTTGTCGTG CTTAAGAATT ATCTAGATGC TCAGTACTAC GGTGAGATCG CTATTGGTAC TCCACCTCAG AAGTTCACTG TGGTTTTTGA CACTGGGAGC TCTAACCTCT GGGTGCCATC ATCAAAATGC TATTTCTCGC TTGCATGTCT CTTGCATCCC AAATACAAGT CTTCGCGTTC AAGCACATAT GAGAAGAATG GAAAATCTGC CGCAATTCAT TATGGCACTG GTGCAATTGC TGGTTTTTTC AGTAATGATG CCGTCACAGT TGGCGATTTA GTTGTCAAGG ATCAGGAATT TATTGAGGCA ACCAAGGAGC CTGGTATAAC ATTTGTTGTA GCTAAGTTTG ATGGTATCCT TGGTCTTGGA TTCCAAGAGA TCTCTGTTGG AAATGCCGCT CCTCTTTGGT ACAACATGCT CAAGCAAGGC CTTATCAAGG AGCCAGTTTT TTCATTTTGG CTTAACCGTA ATGCAGATGA AGAAGAAGGT GGTGAACTTG TATTTGGAGG TGTTGATCCA AATCATTTCA AGGGCAAACA TACATATGTT CCTGTGACAC AAAAAGGCTA CTGGCAGTTT GACATGGGTG ATGTCCTTAT TGGCGGTGCA CCCACTGGGT TCTGTGAAAG TGGCTGTTCT GCGATAGCAG ATTCTGGTAC ATCTTTGCTT GCAGGTCCAA CGACTATTAT CACCATGATA AACCATGCTA TTGGAGCAGC TGGAGTTGTT AGCCAGCAGT GCAAGACTGT CGTGGATCAA TACGGGCAGA CTATTTTAGA TTTACTTTTG TCTGAGACCC AACCAAAGAA AATCTGCTCG CAGATTGGTC TGTGTACTTT TGATGGTACC CGTGGTGTCA GTATGGGCAT TCAGTCGGTG GTGGACAAGG AAAACGCCAA ATTGTCTAAT GGTGTTGGAG ATGCTGCGTG CTCTGCATGT GAGATGGCAG TTGTGTGGAT CCAGAGCCAG TTGAGGCAGA ACATGACTGA AGAACGCATA TTGAACTACG TCAACGAGCT ATGTGAACGC CTTCCCAGCC CAATGGGAGA GTCTGCAGTT GACTGTGCTC AACTCTCAAC AATGCCCACT GTTTCATTCA CCATTGGAGG CAAAGTATTT GATCTTGCTC CAGAAGAGTA TGTTCTGAAA GTTGGTGAGG GACCTGTGGC ACAGTGCATC AGTGGCTTTA TTGCTCTCGA TGTCGCTCCA CCTCGTGGAC CTCTCTGGAT CTTGGGAGAT GTGTTCATGG GCAAATACCA CACCGTGTTC GACTTCGGTA ACGAACAGGT CGGATTTGCA GAGGCAGCGT AAACACGGTC GGGTTGGTTT CGCGTATGGT TTTAGTATGA ACAATCTGTG TCTCAAGTGT TGTTTGTATG TTTTCTGGAG TTGAAGACTT TGAGTCGTAG TAGAAATGGT GGCACAGCTA CTTTTATCCT TTTATGGTTT CCTAACGAAA AAATGGCCTT TGTAGTTTTG AAGGCATTGG CTTTGTAAAT ACCTTCTGGC TCTGCTAAGT AAGTTCGATG GTGAAA 
Length1856
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4565128.. 4569233
Download Sequence
A.thaliana
AGI-codeAT1G11910.1
Descriptionaspartic proteinase A1
TAIR curator summaryEncodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).
Alias[APA1][ATAPA1][aspartic proteinase A1]
Gene coexpression
MR
MR Locus Description
1 Ahg482251 peroxisomal 3-ketoacyl-CoA thiolase 3
1.73205 Ahg903921 SERINE CARBOXYPEPTIDASE-LIKE 49
2 Ahg487672 alpha-galactosidase 1
2.64575 Ahg485161 aldehyde dehydrogenase 2B4
3.87298 Ahg475688 microsomal glutathione s-transferase, putative
4.47214 Ahg485659 monodehydroascorbate reductase 1
4.69042 Ahg491857 Enoyl-CoA hydratase/isomerase family
9.43398 Ahg492801 tripeptidyl peptidase ii
9.79796 Ahg496641 FK506-binding protein 12
12.8062 Ahg488056 cystatin-1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression