Detail



ID : Ahg921434

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921434|scaffold_102715.1
Sequence
TATAATTAAC TCACTTGAAC ATGGATAATG GAACCGTGAT TTTGAAGATG AAGAGAGAAA AGGGAGACTT GATAAGAGCT ATTGGTGTAG TTATAATCTC TCACCAATCT TCCGTTGAGA CAATCCAATT TCTAATCGGG TTCGATGGTG TGTTACCCAC CAAAAGCCCA TGCAAAATAA GAAGTTATTT ATGGGCCCAA AGATGGCCCA TAATCGGTAA CCGCCTCAGC CTTTCTCTGT ACGCAAGATA TTTCATGAGT CATGACTGTA CTTTTCGTGT CGAGGAAGAT CACAAGTCCG TAACAGTTCC GAGAATGAAG CTGCGGTTGA GACATCACGA GACGAGAGAA ACCCTAAAAC TTGAATTGAC CGATACAGAC ACTCTCCATG ATCTCCGGCG ACGGATCAAC CCCACGGCGC CTTCCTCCGT TCATCTATCA CTTAATCGTA AAGACGAGCT CGTCACGCCT TCTCCGGAGG ATACGCTCCG ATCTCTTGGT TTAATATCCG GTGACCTAAT TTACTACTCT CTCGAGGCTG GCGAATCTTC GGGTTGGGAA TTGAGAGATT ATGAAACCCT AGCTCCTCAA TCGGAGAGTA ATCAGGCGAT TGTTCATGAA TCCATGGGTA TTGGATTCGC AGAGGTTGAT TCTAATCCGA ATTCCGGCGT AGAAGATCCA GCGGAAGGAT CCAAGGGGGG AAATTCAGGT ATGGAGGATC CAGAGCCGAT GGATGTTGAG CAGCTTGACA TGGAGCTCGC TGCCGCCGGA AGCAAAAGGT TAAGTGAACC ATTCTTCTTG AAAAATGTAT TGCTTGAGAA ATCTGGTGAT ACTAGTGAAT TGACTACTTT GGCTTTGTCA GTACATGCCG TTATGTTAGA ATCTGGATTC GTGTTGTTCG ATTCTGGCTC TGATAGGTTT AACTTTTCAA AGGAGTTACT TACTGTATCC TTAAGGTATA CTCTACCTGA GCTAATTAAG TCTGAGGATA CCAATACGAT CGAGTCAGTT ACTGTGAAGT TTCAGAACTT AGGCCCTGTG GTTGTAGTTT ACGGAACTGT AGGTGGGTCT AGTGGGCGAG TGCATATGAA TCTTGAAAAG CGTAGGTTTG TGCCCGTTAT CGATTTGGTT ATGGATACTT CGAAATCTGA CGAAGAAGGC TCTTCGAGCA TCTATCGTGA AGTGTTCATG TTCTGGAGAA TGGTAAAAGA TTGTCTTGTT ATCCCGTTGT TGATTGGTAT TTGCGATAAA GCTGGCTTGG AACCTCCACC TTGTCTGATG CGCCTACCGT CAGAACTAAA GCTGAAGATA CTAGAGTTGC TTCCTGGTGT GAGTATTGGA AATATGGCTT GTGTTTGTAC AGAAATGAGG TATCTTGCAT CAGACAATGA TTTGTGGAAA CAGAAATGCT TGGAAGAAGT TGATAATTTT GCTGTCACAG AAGCGGGTGA TTCAGTTAAT TGGAAGGCGA GATTTGCTAC TTTTTGGAGG CAAAAACAGC TTGCTACTGC TAGTGCTACT TTTTGGAGGC AAAACCAGCT TGGAAGACGG AACATTTCCA TGGGAAGAAG CACCATACGA TTCCCTCGAA TCATCGGAGA CCCCCCTTTC ACATGGTTTA ATGGGGATCG CATGCATGGA TCCATTGGTA TTCACCCGGG ACAACCGGCA CGTGGGCTTG GCGGACGAAC TTGGGGACAG CAGTTTACTC CCAGATGCAA CCTTGGGGGA CTAAACTAGC AAACATACCG GGTGAGAAA 
Length1759
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9995536.. 9998640
Download Sequence
A.thaliana
AGI-codeAT1G23780.1
DescriptionF-box family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg931109
4.69042 Ahg471353 fumarylacetoacetase, putative
8.3666 Ahg938434 Protein phosphatase 2C family protein
10.9545 Ahg494108 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
17.9444 Ahg485149
19.5959 Ahg940290 mRNA splicing factor, thioredoxin-like U5 snRNP
21.4243 Ahg488332 helicase associated (HA2) domain-containing protein
22.7596 Ahg491347 BRI1-associated receptor kinase
23.2379 Ahg489475 TCP-1/cpn60 chaperonin family protein
24.7992 Ahg943541 SET domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression