| Annotation |
|---|
| Description | jgi|Araly1|486488|fgenesh2_kg.5__2480__AT3G60190.1 |
| Sequence |
AATTCATTTT CCTATTTTGC CCCTACCGAT ATTTTTCTTC TTCGTCAGTC GTCTCTCTCA GCTCTTGAAG TCTTGGTCTG TTGGCGAATT TTCAAGCAGC TTTCTAATTT TAAACTGAAA TTTCATCTTT GGAACTTTGA ATTCTCTCAT CTGAAACTGA AGGAGAAGGA AGATGACGAC TATGGAGAGT TTGATTGGGT TAGTTAATAG AATACAGAGA GCATGTACCG TACTCGGTGA CTATGGTGGT GGAACTGGAA GTAACGCTTT CAATTCTCTC TGGGAAGCTC TTCCAACCGT CGCCGTCGTC GGTGGTCAGA GTTCTGGGAA ATCTTCAGTT CTTGAGAGCA TAGTTGGGAG AGATTTTCTT CCTAGAGGAT CTGGTATCGT TACCAGACGG CCTTTAGTGT TGCAGCTTCA TAAGACGGAT GATGGAACAG AGGAGTATGC AGAGTTCCTT CATCTTCCCA AGAAGCAATT CACAGATTTC GCTTTGGTTC GCAAGGAGAT TCAGGATGAG ACTGATAGAA TCACAGGGAA GAACAAACAG ATATCTCCAG TTCCTATTCA CCTCAGTATC TACTCTCCAA ATGTTGTGAA TTTGACCCTC ATTGATTTGC CCGGTTTAAC TAAAGTGGCT GTTGAGGGAC AGCCGGAAAC CATTGCTGAG GATATTGAAT CCATGGTTCG CACATATGTT GATAAGCCCA ATTGTATCAT ATTGGCTATA TCTCCTGCCA ACCAAGACAT TGCCACATCG GATGCAATTA AGCTCGCAAA AGATGTTGAT CCAACAGGTG AGAGGACATT TGGTGTTCTT ACCAAGTTAG ACTTGATGGA CAAAGGAACT AATGCATTAG AAGTTCTTGA AGGAAGATCT TACAGGCTGC AACATCCTTG GGTTGGGATA GTGAACCGTT CACAAGCAGA TATTAATAAG AATGTCGATA TGATGCTTGC AAGACGCAAG GAACGAGAAT ATTTTGACAC CAGTTCTGAC TATGGTCACT TAGCCAGCAA AATGGGTTCA GAATACCTGG CAAAGCTGCT CTCTAAGCAC TTGGAGTCTG TTATCAGGAC CCGTATTCCA AGTATACTAT CCTTAATAAA CAAAAGCATT GAAGAACTTG AAAGAGAGTT AGATCGAATG GGTCGGCCTG TTGCAGTTGA TGCTGGGGCT CAACTATACA CTATATTGGA GATGTGCCGT GCATTTGATA AGATATTCAA GGAACATCTG GATGGCGGGC GTCCTGGTGG TGACCGTATC TATGGAGTCT TTGACAACCA ACTTCCAGCT GCACTTAAAA AGCTTCCTTT TGATCGCCAT CTTTCTCTAC AAAGCGTGAA GAAAATCGTG TCCGAGGCAG ATGGCTATCA ACCTCACTTG ATTGCACCAG AACAGGGTTA TCGCCGCCTA ATCGAAGGGG CGCTGGGTTA CTTTAGAGGT CCAGCCGAAG CTTCTGTGGA TGCTGTTCAT TATGTCTTGA AAGAGCTTGT GAGGAAGTCA ATATCAGAAA CTGAGGAGCT AAAGCGTTTC CCTTCACTGC AAGTCGAGCT CGCTGCAGCA GCCAATAGCT CCTTGGAGAA ATTCAGGGAA GAAAGCAAGA AGTCGGTTAT TCGACTTGTT GATATGGAAT CTGCGTATCT AACAGCTGAG TTCTTCCGGA AACTTCCTCA AGAAATGGAA AGACCAGTAG TAACCAACAA CAAAAACCAA ACCGCTTCGC CTTCGCCTGC AACATTAGAC CAGTATGGAG ACGGACATTT CAGAAGGATA GCATCAAATG TATCCGCGTA TGTCAACATG GTTTCGGACA CACTTCGTAA TACCATCCCA AAGGCTTGTG TATATTGTCA GGTTAGACAA GCCAAGCTCG CGTTACTCAA TTACTTCTAC TCACAGATCA GCAAGAGAGA GGGAAAACAG TTGGGACAGT TACTAGATGA AGATCCGGCA TTGATGGACC GGAGACTAGA GTGCGCGAAG AGGCTCGAGT TATATAAGAA AGCAAGAGAT GAGATTGATG CTGTTGCCTG GGTACGATGA TAAACCCAAA GTGTGTGTTT CTGGTGATGG TTGTTTTTAA ACTAAAATTC GTGTGTTGTT TAAGTTCGTT GGCTATGTCT TTGTATATGT ATATGATCAT CAGACCCTGT TGAGAGAGAT AATAAACTTA TCATTTCTAT TTAAAAACGC CATGGCGT |
| Length | 2208 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 18643615.. 18647275 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G60190.1 |
| Description | DYNAMIN-like 1E |
| TAIR curator summary | At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ‘dynamin 2‘ domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. |
| Alias | [ADL1E][ADL4][ADLP2][DL1E][DRP1E][EDR3][DYNAMIN-like 1E][ARABIDOPSIS DYNAMIN-LIKE 4][DYNAMIN-LIKE PROTEIN 2][DYNAMIN-RELATED PROTEIN 1E][ENHANCED DISEASE RESISTANCE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.60555 |
Ahg332329 | ABC transporter family protein |
| 4.89898 |
Ahg471435 | proline-rich family protein |
| 6.9282 |
Ahg471353 | fumarylacetoacetase, putative |
| 7.2111 |
Ahg484011 | myb-like HTH transcriptional regulator family protein |
| 9.64365 |
Ahg340908 | glucan synthase-like 10 |
| 10.0995 |
Ahg496189 | DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
| 10.247 |
Ahg495939 | regulatory particle triple-A ATPase 3 |
| 13.2665 |
Ahg475653 | LETM1-like protein |
| 13.5647 |
Ahg495042 | exocyst complex component 84B |
| 15.4919 |
Ahg478714 | Chaperone DnaJ-domain superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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