Detail



ID : Ahg471816

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471816|fgenesh2_kg.1__1770__AT1G16180.1
Sequence
ATGTTTGCAG CTTCTTGTCT CGCATCGTGT TGTGCTGCTT GTGCATGCGA TGCTTGCCGT ACTGTGGTTT CTGGGATCAG CAGACGTTCT GCTAGAATTG CTTACTGTGG TCTCTTTGCA CTTTCCTTAA TCGTTTCATG GATTCTCCGT GAAGTTGCTG CTCCTCTCAT GGAGAAGCTC CCTTGGATTA ACCACTTTCA CAAGACACCT GATCGTGAAT GGTTTGAGAC TGATGCTGTG TTGCGTGTCA GCTTAGGGAA TTTCTTATTT TTCTCGATTC TGTCGGTTAT GATGATCGGT GTCAAAAATC AGAAAGACCC TCGTGATGGT ATACACCATG GTGGTTGGAT GATGAAGATA ATCTGTTGGT GCATTTTAGT CATCTTAATG TTCTTCCTTC CCAATGAAAT CATCAGTTTC TATGAGTCGA TGTCAAAGTT TGGTGCTGGA TTTTTTCTTC TTGTTCAAGT TGTGCTTCTT TTGGATTTCG TTCATGGGTG GAATGACACG TGGGTTGGCT ACGACGAGCA GTTCTGGTAT GCTGCGTTGC TCGTTGTGTC TCTTGTATGT TACTTGGCAA CATTCGTCTT CTCTGGGCTT CTCTTCCACT GGTTTACTCC ATCTGGACAT GATTGTGGAC TCAACACTTT CTTCATTATC ATGACTTTGA TATTTGTATT CGTCTTTGCT GTCGTAGTTT TGCATCCTGC TGTCGGTGGA AGCATTTTAC CAGCATCCGT TATATCTCTC TACTGCATGT ACCTCTGTTA CAGCGGACTT GCAAGTGAGC CCCGTGATTA CGAGTGCAAT GGTCTCCACA AACACTCCAA AGCTGTTTCA ACAGGCACAA TGACCATTGG ATTACTCACA ACTGTACTCT CTGTCGTTTA TTCCGCTGTT CGTGCTGGTT CTTCAACTAC TCTTCTCTCA CCTCCTGATT CTCCTCGGGC AGAGAAGCCG CTGCTTCCGA TAGATGGGAA AGCAGAAGAG AAGGAAGAGA AAGAGAATAA AAAACCAGTG TCATACTCAT ACGCATTCTT CCACATCATC TTCTCCCTCG CGAGCATGTA CTCTGCAATG CTCTTAACCG GCTGGTCAAC TTCAGTTGGT GAAAGTGGTA AGCTGGTGGA TGTAGGGTGG CCTTCAGTGT GGGTCCGTGT TGTGACCAGC TGGGCCACTG CTGGTCTCTT CATCTGGTCG CTTGTTGCTC CCATTCTCTT CCCCGACCGT GAGTTCTGAG CTAATGCATC TACTGGAGAT CCTGAAAAAC TTTTCATGAA TCTTGAATTT GTAAAAAAAA AAAAATTATT CTATCTTTCG ACTATAATAG AGTCTCGTTT GCTTAATCAC GCATGGTCTT TGTTGGCACA TCTGTAATAT AATTCCTTTC TCGTAATTTT CATCGGTCTC GAATTCCCCA CAATTGCGTT TTGTACGATT TAGCGTTTGT CTTTTGTTTG GTC 
Length1463
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6486564.. 6488937
Download Sequence
A.thaliana
AGI-codeAT1G16180.1
DescriptionSerinc-domain containing serine and sphingolipid biosynthesis protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg483698 Nucleotidyltransferase family protein
5.65685 Ahg492373 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
5.91608 Ahg486867
6.32456 Ahg481753 AAA-type ATPase family protein
10.8167 Ahg891774
19.4422 Ahg321144 Kinase-related protein of unknown function (DUF1296)
20.8327 Ahg929772 polyol/monosaccharide transporter 5
21.3307 Ahg488966 ubiquitin 4
22.8035 Ahg342166 pumilio 5
24.4949 Ahg491111 Uncharacterised conserved protein (UCP030210)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression