| Annotation |
|---|
| Description | jgi|Araly1|471986|fgenesh2_kg.1__1940__AT1G17745.1 |
| Sequence |
GCATGTGCTT CTCATTTTAT ATACTCTTTT ACCAAACAAA CTACTATTCA ACTTAACTTA TTTTTAATTT TGACCATAAT GAGAAAGATT AAATTAAAAC TCATCCATTA CCTCATGTAA GCTCTATATT AACCACGTTA GTCCTTCTTC ACACACTCAC AACAACCAAT CATAGTTAAA AAAAAAAAAA GCAGTCATGG CATTTTCATC TTCATGTTCG TCCGTCAAGG CCGTCAACTC ACGGTGGACG TCTCCGTCTC CGTCACCGTC TTCTAGATTC GCCGTCATCC CTGCTTTCCT CCACCGCCGT TACGCAACAA GCGTCAAACT AACGGCCACA AGCGCCGCCT TAAAAACCGT CGAGCAAACG ACGTTAACAG AGGATAACAA ATTCTCCACC GTCGGATCTG ATTCTGATGA ATATAATCCA ACGCTTCCAA AGCCGAGGAT CCTCGTCGCC GAGAAACTCG GAGAAGCCGG CGTGAATCTC CTCAAGGAAT TCGGTGACGT TGACTGCTCT TATGATCTTT CACCGGAGGA TCTGAAGAAG AAAGTGGCGG AGACTGACGC TCTGATCGTG AGAAGCGGGA CAAAAGTGAC GAGGGAAGTG TTTGAGGCGG CGAAGGGGCG GTTGAAAGTG GTCGGAAGAG CCGGAGTTGG GATTGACAAT GTTGATCTGC AGGCAGCGAC GGAGCACGGC TGTTTGGTGG TTAATGCTCC GACGGCTAAT ACGGTGGCCG CTGCCGAACA TGGAATTGCT TTGCTTGCTT CTATGGCACG TAACGTCGCT CAGGCCGACG CGTCTATTAA AGCCGGAAAA TGGGAGAGGA GCAAGTACGT CGGCGTATCT CTTGTCGGAA AAACCTTAGC CGTGATGGGT TTCGGGAAAG TCGGGACGGA GGTGGCGAGA AGAGCCAAGG GTCTAGGCAT GAACGTTATC TCCCACGACC CTTACGCGCC AGCTGACAGA GCCAGAGCTC TCGGTGTCGA TCTTGTCTCC TTTGATCAAG CTATCTCCAC CGCCGATTTC GTCTCCCTCC ACATGCCTTT AACTCCGGCC ACCAAAAAGG TCTTCAACGA CGAAACCTTC TCGAAGATGA AGAAAGGTGT TCGTCTCATT AATGTCGCTA GAGGCGGCGT CATCGATGAG GATGCGCTCG TTAGAGCTCT TGATACCGGA ATCGTTGCTC AGGCAGCATT AGATGTGTTC TGTGAGGAAC CACCATCGAA AGACAGCAAA TTGATTCAGC ATGAAAATGT TACTGTAACA CCTCATCTTG GAGCTAGCAC AAAAGAAGCT CAGGAAGGTG TAGCCATCGA GATAGCAGAG GCTGTAGCAG GGGCATTAAG AGGCGAGCTA TCAGCTACTG CGGTCAATGC TCCAATGGTT GATCCTGAGT TTTATCTGAC TAGGGAGGTT AGCTGTCCAA TTAGCATCTG GAGTAAAGGA GTACAGTCCA TTAGGGTGGT GTATCGGTCA GCTCGGAACC GAGATGATTT GGATACTAGA CTACTTCGTG CAATGATCAC AAAGGGAATC ATTGAACCGA TCTCAGATTC ATACGTCAAC CTTGTGAATG CTGATTTCAT AGCTAAACAA AAGGGTCTTC GTATTAGTGA AGAACGAATG GTGGTTGATT CATCACCAGA GTACCCTGTT GATTCTATCC AAGTTCAGAT TTTGAATGTG GAATCGAACT TCGCTGGTGC TGTCTCTGAT TCTGGTGATA TAAGTATCGA AGGGAAAGTG AAATATGGAG TTCCGCATTT AACCTGTGTC GGATCATTTG GTGTGGATGT GAGCCTTGAA GGGAATCTGA TACTGTGCAG GCAAGTGGAT CAACCAGGGA TGATTGGACA GGTTGGTAAC ATACTTGGGG AACAAAACGT GAATGTGAAT TTCATGAGTG TTGGAAGAAC GGTCTTGAGG AAACAAGCGA TAATGGCGAT TGGAGTTGAT GAAGAACCAG ACAACAAAAC ACTTGAGAGG ATTGGGGGTG TTTCTGCGAT TGAAGAGTTT GTGTTTCTGA AACTATAAAG TTTGAGATGG AGTTGCATTG TGGTGTATGA AGAATAAAAC TGTGACCCGG ATTAAGGTGT TTTATCCTGT G |
| Length | 2111 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7105470.. 7109411 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G17745.2 |
| Description | D-3-phosphoglycerate dehydrogenase |
| TAIR curator summary | encodes a 3-Phosphoglycerate dehydrogenase |
| Alias | [PGDH][3-phosphoglycerate dehydrogenase] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg481277 | Cytosol aminopeptidase family protein |
| 3.16228 |
Ahg488204 | pheophytinase |
| 5.91608 |
Ahg487142 | Pyridine nucleotide-disulphide oxidoreductase family protein |
| 6.7082 |
Ahg948265 | Basic helix-loop-helix (bHLH) DNA-binding family protein |
| 7.74597 |
Ahg482004 | glutathione S-transferase PHI 10 |
| 8.48528 |
Ahg490155 | Ubiquitin family protein |
| 8.48528 |
Ahg480216 | oxophytodienoate-reductase 3 |
| 9.53939 |
Ahg482003 | glutathione S-transferase PHI 9 |
| 10.0995 |
Ahg488679 | |
| 11.7473 |
Ahg477741 | pathogenesis-related 4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|