Detail



ID : Ahg472088

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472088|fgenesh2_kg.1__2042__AT1G18660.4
Sequence
TGTTCCGACC CAAAAATCAG GAAGAAGAAG ATTGGCAAAC AAAAAGGATT CACCTTTAGT GACTGAGCTG AGAGAGAGAG ATTGAAGAAA AAAAAAAAGA GTGAAGCTTG GAGAGAGAAT AACCACGTAG AGGTTTATAA TCCGTGGTTG CAAACCAAGG ACCCAGAATT TCTGGAATTT CTTCCGTTGA TCGATCACTC AGATGTCGAA CGAAGAATCT CTTCCGGCAT TCACTTTGTT TGGTTTGGAT GATGTCGAAA ATTACGGTCT GGTCACTGAA GCAGACAATT CGTTACCTTT AGATATACAC AATCAGGTTT TTCAACTTGT GGAGAAGGGA AACCAATCAT TCAAAGAGTC TCGCTTTGAA GAGGCAATTA GCAGTTATTC AAAGGCCAAT TCTATTAAAC CTCTTGACCC TATTGTTCTT GGCAATAGAA GTGCTGCTTA TATTAGATTT GGCCAATATC TGAAGCAGAG ATCTGCATCA ATTTCTGAAT ATAAACCTCT GAATGGTTTT GATATGTCGA TGCTTGGGGA ACTTGCTCTT AAGGATGCTG ATAAGCTGAT GAATCTTCAA AGCAGTTCAG TGAAGTCATA TACTACAAAG GCTTGTGCCC TCATGTTGCT AGAAAGATAT GAGGTAGCAC GTGACACTAT CCTCTCAGGT CTACAGATTG ATCCCTTTAG CGATCCTCTC CGATCCAATC TTCAGGAATT GGAGAAAGTG ATGCCTAATT CGATGCGTAA AACCCATGGA AAGGCTGAGC GGTCTGATGA CTTTGATTGC ACTGTTTGCC TGAAATTGCT GTATGAACCT GCTACAACCC CATGTGGGCA TACATTCTGC CGATCCTGCC TCTTTCAGTC AATGGATCGC GGCAACAAAT GTCCACTATG TCGAACTGTC ATTTTTATGA CTCCAAGAAC ATGCGCTGTC AGTGTGACAC TGAATAACAT CATACAGAAA AACTTTCCAG AGGAGTATGC TGAAAGGAAA TCAGAGCAAG ACACTCTGGT CCACTTAGGC AATGAAAGTA TGCCCCTTTT CGTCATGGAT GTGATCATCC CCTGTCAAAA GTTGTCTCTT CACATATTTG AACCACGATA TCGACTAATG GTGAGAAGAA TAATGGAAGG AAATCATCGG ATGGGAATGG TAGCTCTTGA TTCTGCGACA GGTTCTCCAG TGGATGTTGC TTGCGAAGTT GAAATCACAG AGTGTGATCC ACTCCCGGAT GGACGTTTTG TCTTGGAGCT GGAAAGCCAT AGAAGGTGCC GCATTGTAAA AGCTTGGGAT CAAGATGGGT ATCGTGTTGC AGAGGTTGAA TGGGTGACAG ATATACCACC ACAAAGCGAG CAAGGGAAAG CAGATCTGCG GGAACTGACG ACCAGCGCAG CATCATTTGC TCGGTCATGG CTAGATAGAG CAAAGGAAGC AGCTAGACAA GGAGACAGAA GAAGACTTGA ATTACTTCTA AATGTTGAAT CTATGATACC AACGCCTCAA GATCCCGAAC GCTTCAGTTT CTGGCTTGCC ACATTGACAG ATAGGAGACC TTCAGAAAGA TTGGAACTAC TTCGGCTTCA GGATACTGGA GAGTTTTACC AGTCCTTTTC TTTTGATTAT TGAAACTTGT TGTTGCAGAG AATAAAGCGC GGGTTGATAT ATCTCCGATC AGTAGAAAGA GGATGCAGAA TGCAATGAAC TGGCATCATC AGGGCATTGT ATTGCCGATT GAACTACAGA GATAAACTTG TTCATAAGAA GGTTGACAAA AACATTATTC ATGATTAAAG GAATACATAA GATAGAGATC CATGTAGGAT CGCTATCATC CTTTGTCGGA TCCATTGTTG TAGATTTTGT TTGCGAGTGT ATTTTACTTA ATTACCATAT TCTTCATGAT GCAACTGCAG CAA 
Length1923
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7465777.. 7470460
Download Sequence
A.thaliana
AGI-codeAT1G18660.4
Descriptionzinc finger (C3HC4-type RING finger) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.19615 Ahg488439 NAD(P)-binding Rossmann-fold superfamily protein
7 Ahg934499 SOUL heme-binding family protein
11.3137 Ahg482529 FAD/NAD(P)-binding oxidoreductase family protein
12.5698 Ahg479910 Protein kinase superfamily protein
13.8564 Ahg489815 Mitochondrial transcription termination factor family protein
16.9706 Ahg472404 Chaperone DnaJ-domain superfamily protein
21.1424 Ahg330043 Chlorophyll A-B binding family protein
21.6333 Ahg943412 transducin family protein / WD-40 repeat family protein
23.3666 Ahg481404 AFG1-like ATPase family protein
24.3721 Ahg490889 cytochrome P450, family 81, subfamily H, polypeptide 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression