Detail



ID : Ahg472098

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472098|fgenesh2_kg.1__2052__AT1G18730.3
Sequence
CTCCACTGAC ACCATCAAGA AGTAACAATG GCTGAAGCTT TCACAAGTTC CACCTTCACA AATCTTCATA TCCCTTCTTC CTCCAGTCAC TCGCCTAAGC AGATTTCAGG ACCAAATCAT GGATATTGGC TATCTATGAA AGTTAATGAG AAGAGGGAAA AGAATTTGAT GAGAGGAAGA TTATGTGTAA GAAAGGCATT GCCACATGAT TTGCCATTAA TGGCAGTGAT GGTTCAACAA ATAGAAGGAA TGCGTGATAT CATTACAGAG AAACACGTGT GGCATCTAAG TGATAAAGCT ATCAAGAATG TCTATATGTT CTACATCATG TTCACTTGTT GGGGATGTTT GTACTTCGGT TCCGCAAAAG ATCCATTCTA TGACTCGGAG GAGTACCGTG GAGATGGAGG GGATGGAACT GGATATTGGG TCTATGAAAC TCAAGAAGAC ATAGAAGAGA AAGCAAGAGC AGAGCTATGG CGTGAAGAAC TTATTGAAGA AATTGAACAG AAAGTTGGTG GCTTAAGAGA GCTTGAAGAA GCTGTTACTA AGTAGAAAAC TAACTTGTAA ATCATAAATC TAATTCACAT ACACATATAT TTTGTCTTAT ATGAGTCATA CAACATTATA TATATATATA TATATATTAT ATGTTATGT 
Length659
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7529245.. 7530894
Download Sequence
A.thaliana
AGI-codeAT1G18730.1
DescriptionNDH dependent flow 6
TAIR curator summarylikely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity.
Alias[NDF6][PnsB4][NDH dependent flow 6][Photosynthetic NDH subcomplex B 4]
Gene coexpression
MR
MR Locus Description
15.2971 Ahg922278 phosphoribulokinase
15.6844 Ahg495943 methyl esterase 18
17.4929 Ahg492357 Protein kinase superfamily protein
17.6068 Ahg949647 crumpled leaf
29.5296 Ahg490231 photosynthetic electron transfer C
29.5466 Ahg471331 Glycine cleavage T-protein family
30.4959 Ahg950896 Pentatricopeptide repeat (PPR) superfamily protein
30.7409 Ahg929337 thioredoxin M-type 4
31.7017 Ahg491390 glycine decarboxylase P-protein 1
37.7359 Ahg472228 ferredoxin-NADP(+)-oxidoreductase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression