Detail



ID : Ahg472235

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472235|fgenesh2_kg.1__2189__AT1G20090.1
Sequence
TGTTCTCTTA GCTGTCTCAG AGTTGTTGTT GTTATTGTCT ACTCCTATAG GCTCCCTCTC AAAGTCATCA ATCAACCGCC AATTTAACCT CCTCCTTCTT CTTCTTCTTC TAATTTGTGG GATTCTCAGA TTCACAAGCT TTCGAGCTCG AAATGTGGAG GATTTGAGGA AGAATCAACT TTTTTTTGTT TTTTCGATCT TGCGGCGGAG ATGAGTGCGT CAAGGTTCAT AAAGTGTGTG ACCGTCGGAG ATGGTGCCGT CGGAAAAACC TGCATGCTGA TTTCTTACAC AAGCAATACT TTCCCTACAG ATTATGTGCC AACTGTTTTC GACAACTTCA GTGCTAATGT GGTTGTTGAT GGGAACACTG TCAATCTTGG ATTGTGGGAT ACAGCAGGTC AAGAAGACTA CAACAGGTTA CGACCTCTGA GTTATCGTGG TGCCGATGTT TTCATTCTTG CTTTCTCTCT CATCAGCAAG GCTAGCTATG AGAATATTGC CAAGAAGTGG ATTCCTGAGC TCAGGCATTA TGCTCCTGGT GTTCCCATTA TCCTCGTGGG AACAAAACTC GATCTTCGAG ATGACAAGCA ATTCTTCATT GATCATCCTG GTGCAGTGCC AATTACAACA AACCAGGGAG AGGAACTGAA GAAACTGATT GGATCTGCGG TCTACATTGA ATGTAGTTCA AAGACACAGC AGAACGTGAA GGCAGTGTTT GATGCAGCCA TAAAAGTGGT GCTTCAGCCA CCAAAGCAGA AGAAGAAGAA AAAGAATAAG AACCGTTGCG CGTTCTTGTG ATATGCAGAA TCTCTAAGCT AGGTAAACCA ACTAAAGAAG AAGAAGAAGA TGATGATTTC AACTATTTGA TTCGTCCCCA TTTTAATATG ATAATTCGAC GGGAAGGGAG ACATCTCGAG TAGCTTTTTT TGTTGTTGTG TCTTTTACTC TTTGCTGGTG AATCTTTTGA GTTCACAGAG TAAGAGACCG TGTGTTCTAC TCTTGCTATG TAGACTAATC TGTCTCTCTC TTCTCTTTTG TTCTTGATGG GGATCAATTT GTATTAACAA ATGAATCTAA TTAATATT 
Length1088
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8179489.. 8181472
Download Sequence
A.thaliana
AGI-codeAT1G20090.1
DescriptionRHO-related protein from plants 2
TAIR curator summaryMember of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening.
Alias[ARAC4][ATRAC4][ATROP2][ROP2][Arabidopsis RAC-like 4][RHO-related protein from plants 2]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg493567 RNA binding (RRM/RBD/RNP motifs) family protein
11.0454 Ahg928694 L-O-methylthreonine resistant 1
20.4206 Ahg474507 STRUBBELIG-receptor family 6
25.4558 Ahg927472 P-loop containing nucleoside triphosphate hydrolases superfamily protein
32.1714 Ahg931800 3-ketoacyl-CoA synthase 9
37.55 Ahg943901 phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative
45.4753 Ahg928125 Metallopeptidase M24 family protein
46.1736 Ahg900167 3-ketoacyl-CoA synthase 10
54.1664 Ahg947488 beta-1,3-glucanase_putative
54.6077 Ahg922635 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression