Detail



ID : Ahg900167

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900167|Al_scaffold_0004_817
Sequence
ATGGGTAGAT CCAACGAGCA AGATCTACTC TCTACCGAGA TCGTCAACCG TGGGATCGAA CCATCCGGTC CTAACGCCGG TTCACCAACG TTCTCGGTCA GGGTCCGGAG ACGTTTGCCG GATTTTCTTC AGTCGGTGAA CTTGAAGTAC GTGAAACTTG GTTACCACTA CCTCATAAAC CATGCGGTTT ATTTGGCGAC CATACCAGTT CTTGTGCTGG TTTTTAGTGC TGAGGTTGGA AGTTTAAGCA GAGAAGAGAT TTGGAAGAAG CTTTGGGACT ACGATCTTGC AACTGTCATC GGATTCTTCG GTGTCTTTGT CTTAACCGCT TGTGTCTACT TCATGTCTCG TCCTCGTTCT GTTTATCTTA TTGATTTCTC TTGTTACAAG CCCTCCGATG AACTCAAGGT GACAAAAGAA GAGTTCATAG AATTAGCGAG AAAATCAGGA AAGTTCGACG AAGAGACACT CGGTTTCAAG AAGAGGATCT TACAAGCTTC AGGCATAGGC GACGAGACAT ACGTCCCAAG ATCCATCTCT TCATCGGAAA ACATAACAAC GATGAAAGAA GGTCGTGAAG AAGCCTCAAC AGTGATCTTT GGAGCACTAG ACGAGCTCTT CGAGAAGACA CGTGTCAAAC CTAAAGACGT TGGTGTCCTT GTGGTTAACT GTAGCATCTT TAACCCGACA CCGTCGTTGT CCGCAATGGT GATTAACCAT TACAAGATGA GAGGGAACAT ACTTAGTTAC AACCTTGGAG GGATGGGATG TTCTGCTGGA ATCATAGCTG TTGATCTTGC TCGTGACATG CTTCAGTCTA ACCCTAATAG TTACGCTGTT GTTGTGAGTA CTGAGATGGT TGGGTATAAT TGGTACGTGG GACGTGACAA GTCAATGGTT ATACCTAATT GCTTCTTTAG AATGGGTTGT TCTGCCGTTA TGCTCTCTAA CCGCCGTCGT GACTTTCGCC ATGCTAAGTA CCGTCTCGAG CACATTGTCC GGACTCATAA GGCTGCCGAC GACCGTAGCT TCAGGAGTGT GTACCAGGAA GAAGATGAAC AAGGATTCAA GGGGTTGAAA ATAAGTAGAG ACTTAATGGA AGTTGGAGGT GAAGCTCTTA AGACCAACAT CACTACCTTA GGCCCTCTTG TTCTCCCTTT CTCCGAACAG CTTCTCTTCT TTGCTGCTTT GCTCCGCCGA ACTTTCTCAC CTGCGGCCAA AACCTCCACA ACCACCTCCT TCTCTTCTTC GGCCACAGCT AAAACCAATG GAATCAAGTC TTCCTCTTCC GATCTGTCCA AGCCATACAT CCCCGACTAC AAGCTCGCCT TCGAGCACTT CTGCTTCCAC GCGGCAAGCA AAGTAGTGCT TGAGGAGCTT CAGAAGAATC TAGGCTTGAG TGAAGAGAAC ATGGAGGCTT CAAGGATGAC ACTTCACAGG TTTGGAAACA CTTCTAGCAG TGGAATCTGG TACGAGCTGG CTTACTTGGA AGCCAAGGAA AGTGTTCGTA GAGGCGATAG GGTTTGGCAG ATCGCGTTCG GGTCAGGTTT TAAGTGTAAC AGTGTGGTGT GGAAGGCAAT GAAGAAGGTG AAGAAGCCAA CTAGGAACAA TCCTTGGGTG GATTGTATCA ACCGTTACCC TGTGCCTCTC TAA 
Length1653
Protein Sequence
Protein Residue
Map Locationscaffold_4: 5800206.. 5802275
Download Sequence
A.thaliana
AGI-codeAT2G26250.1
Description3-ketoacyl-CoA synthase 10
TAIR curator summaryepidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.
Alias[FDH][KCS10][FIDDLEHEAD][3-ketoacyl-CoA synthase 10]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg473059
2.44949 Ahg491143 plasma membrane intrinsic protein 3
3.74166 Ahg943905 cinnamyl alcohol dehydrogenase 9
4.89898 Ahg921841 glycosylphosphatidylinositol-anchored lipid protein transfer 1
6 Ahg484057 Auxin efflux carrier family protein
6.63325 Ahg481566 pleiotropic drug resistance 4
7.28011 Ahg934076 tubulin beta-9 chain
7.93725 Ahg471997 white-brown complex homolog protein 11
8 Ahg318437 Pollen Ole e 1 allergen and extensin family protein
10 Ahg331018 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression