| Annotation |
|---|
| Description | jgi|Araly1|927472|scaffold_203033.1 |
| Sequence |
TTTTGTTTTG AGTAAAAGAG GAAATGGTGG GTAGTAGTAA TTCGTTGGCG GGTCTACAAG ATCACTTGAA ATTAGCGAGA GAATACGCAC TAGAAGGATC CTACGACACA TCTGTCATCT TCTTCGATGG CGCCATTGCT CAGATCAACA AGCATTTAAA CACCCTTGAC GATCCTTTGG CCCGGACTAA ATGGATGAAC GTTAAAAAAG CCATAATGGA AGAGACGGAA GTTGTTAAGC AATTGGATGC AGAGAGGAGA GCATTTAAAG AAGCTCCCAC TGGGCGTCGC GCTGCTTCTC CGCCTATCAA TACCAAATCA TCCTTTGTTT TTCAGCCCTT GGATGAGTAT CCAACTTCAT CCGCTGCTCC TATGGATGAT CCTGATGTGT GGAGGCCTCC TACCCGTGAT GTTTCTAGTA GAAGACCCGC CAGGCCTGGT CAAACTGGTA CCAGAAAATC ACCTCAAGAT GGGGCTTGGG CTCGTGGCCC TACAACACGA ACAGGTCCAG CTTCCCGTGG TGGAAGAGGT GGGGCTACTA GTAAGTCAAC TGCAGGTACC CGCTCTTCCA CTGCCGGTAA GAAGGGAGCT GCCTCAAAAT CTACCAAGGC AGAGTCTATG AATGGTGATG CTGAAGACGG GAAGTCAAAA CGGGGATTGT ATGAGGGACC TGATGAGGAC CTGGCCGCTA TGCTTGAAAG GGATGTGTTG GACTCAACTC CTGGTGTCCG TTGGGATGAT GTTGCAGGTT TGTCTGAAGC CAAAAGGCTG CTTGAGGAGG CAGTTGTCCT TCCTTTATGG ATGCCCGAAT ACTTTCAGGG TATTCGAAGA CCATGGAAAG GAGTTCTCAT GTTTGGTCCT CCTGGGACAG GTAAAACCCT GTTGGCAAAA GCAGTTGCAA CCGAGTGTGG TACCACCTTC TTCAACGTCT CTTCTGCTAC ATTAGCTTCA AAATGGCGTG GAGAGAGTGA GCGCATGGTC AGATGCCTGT TTGATCTGGC TAGGGCATAT GCTCCAAGTA CAATTTTTAT TGATGAGATC GACTCTCTCT GCAATTCTCG GGGGGGTTCT GGAGAGCATG AATCGTCAAG AAGGGTGAAA TCGGAACTCC TAGTTCAAGT AGATGGAGTG AGCAATACAG CGACAAATGA AGACGGTAGT CGCAAAATAG TGATGGTACT GGCAGCTACC AACTTCCCAT GGGACATAGA TGAAGCTCTC AGGAGGAGGC TGGAAAAACG TATATATATC CCACTTCCAG ATTTTGAAAG TCGTAAGGCA CTTATCAATA TCAATCTGAG AACAGTCGAG GTGGCGAGTG ATGTTAATAT TGAAGATGTG GCCCGGAGAA CGGAAGGGTA CAGTGGAGAC GATCTGACTA ACGTGTGCAG GGACGCATCA ATGAACGGGA TGAGGCGTAA GATAGCGGGG AAAACGAGGG ATGAGATAAA GAACATGTCG AAAGACGATA TATCAAATGA TCCTGTGGCT ATGTGTGATT TCGAAGAGGC CATTAGGAAA GTGCAACCGA GTGTGTCTTC CTCTGATATT GAGAAACACG AGAAGTGGCT CTCTGAGTTT GGATCTGCTT AATTTAAACC CACTTTTTCT TA |
| Length | 1612 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17994693.. 17997342 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G80350.1 |
| Description | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| TAIR curator summary | encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects. |
| Alias | [AAA1][ATKTN1][BOT1][ERH3][FRA2][FRC2][FTR][KTN1][LUE1][BOTERO 1][ECTOPIC ROOT HAIR 3][FRAGILE FIBER 2][FURCA2][FAT ROOT][KATANIN 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.87298 |
Ahg488158 | no exine formation 1 |
| 3.87298 |
Ahg485126 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 |
| 5.2915 |
Ahg472063 | actin-related protein 4 |
| 11.3137 |
Ahg475057 | Chaperone DnaJ-domain superfamily protein |
| 12 |
Ahg488148 | ARF GTPase-activating protein |
| 14 |
Ahg906831 | chromatin remodeling 8 |
| 15.6205 |
Ahg490357 | ARM repeat superfamily protein |
| 21.4243 |
Ahg951281 | Major facilitator superfamily protein |
| 24.2487 |
Ahg483352 | tetratricopetide-repeat thioredoxin-like 3 |
| 25.4558 |
Ahg472235 | RHO-related protein from plants 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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