| Annotation |
|---|
| Description | jgi|Araly1|495719|fgenesh2_kg.8__1535__AT5G56290.1 |
| Sequence |
CAACAAAAAC ACCGCCACGA GACGAGCCAA ACTATAGATT GGGATTTGGG AGGTGATTGA TGATCAATTC CGGACAACGG AAGAAACCAT ACTAATAGAC TCGACGACGG CGGTTACGGC GGAGTAGAGA ACCGTTGGAA ACATGGCGAT GAGAGACCTT GTTAACGGCG GAGCCGCTTG TGCCGTTCCC GGTTCTTCTT CTTCTTCTAA TCCTCTCGGA GCTCTCACCA ACGCTCTACT TGGTTCGTCT TCCAAAACCC AGGAAAGGCT TAAGGAGATA CCTAATGCTA ACCGTTCAGG TCCTGGCCCA CAATTTTACT CTGAAGACCA ACAGATAAGG TCACTTCCTG GTTCTGAGTT GGATCAGCCA GGTCTGCAAC CGGGTGCTCA GGGTTCAGAG TTCTTCCGTG GTTTCCGCTC TGTAGATCAG AATGGTCTGG GTGCGGCTTG GGATGAGGTA CATCAAGGTG GACCTATGCC TCCAATGGGA CCTATGTATG AGCCAGTTCA GCCTACATTT GAAGGACCCC CACAGAGAGT TTTATCAAAC TTTCTGCATT CATTTGTTGA GAGTAGCCGT GGTGGTATTC CATTTCGTCC AGCACCTATT CCAGTTCTGG GATTGTCGCA AAGTGACAAA CAATGTATAC GTGATCGTAG TAGCATAATG GCCCGGCATT TTTTTGCTGA TAGGGGAGAG GAATTTATCA ATTCTCAGGT AAACGCATTA TTATCATCTT TAGATATCGA CGATGGGATA CAAGCTCGAG GTCATGTTCC CGGGAGATTT CGGGATCTAG ATGATTACTG GAATGAGTCT CAAGCTATTG TGAAACCTAA TTTACATCCT GCTGACAATT GGGCGGCTGA ATTTAACCAA CATGGGATGG ATCACGGTGG TCCTGAATCA TGGGTCCAGT CTTTTGAGCA ACAACATGGT GTGAATGGGT GGGCCACTGA GTTTGAGCAG GGTCAATCTC AATTGATGTC AAACCAAATG AGAAGTATGG ATATGCAAAA TATAGCTGCA ATGGAGCAGA CTCGTAAGCT TGCCCATACA CTATCTCAGG ATGGGAATCC GAAATTTCAG AATTCAAGAT TCCTCCAATT TGTTTCAAAG ATGAGCCGTG GTGAACTTAT TATTGATGAG AATCAGGTCA AACAAGCATC AGTCCCCGGG GAATGGGCTA CTGAATATGA ACAGCAGTAT CTGGGGCCAC CAAGTTGGGC TGATCAATTT GCAAATGAGA AACTTTCACA TGGACCAGAA CAGTGGGCTG ATGAGTTTGC TTCCGGGAGA GGACAGCAAG AATCAGCTGA GGACCAATGG GTTAATGAGT TTTCAAAGTT GAATGTTGAT GACTGGATAG ATGAATTTGC TCCCGTGGGT GAGAGTTCAG CTGATGCATG GGCAAATGCT TATGATGAGT TTCTGAATGA GAAAAATGCT GGAAAACAAA CCAGTGGTGT CTACGTCTTC TCTGACATGA ATCCTTATGT GGGTCACCCT GAACCTATGA AAGAAGGGCA GGAATTGTTT CGGAAAGGAC TTCTGAGTGA AGCAGCGCTT GCTCTAGAAG CTGAGGTTAT GAAAAACCCT GAGAATGCTG AAGGTTGGAG ATTACTTGGG GTTACACACG CAGAGAACGA TGATGATCAA CAGGCAATAG CTGCAATGAT GCGTGCACAA GAAGCTGATC CCACAAATCT AGAGGTGCTT CTTGCGCTTG GTGTGAGTCA TACCAACGAG TTGGAGCAAG CAACTGCTTT GAAATATTTA TATGGATGGC TGCGAAATCA TCCAAAGTAT GGAGCAATTG CACCTCCGGA GCTAGCTGAT TCTCTATACC ATGCTGATAT TGCTAGATTA TTCAATGAAG CTTCTCAGTT GAATCCTGAG GACGCCGATG TGCATATAGT GTTGGGCGTG CTCTACAATC TGTCGAGGGA GTTTGATAGA GCAATTACTT CCTTCCAAAC AGCATTACAA CTAAAACCAA ACGATTATTC TCTATGGAAT AAGCTAGGTG CAACACAAGC CAACAGTGTC CAGAGTGCTG ATGCCATATC TGCTTATCAA CAGGCTCTAG ATTTAAAACC TAATTATGTT CGTGCTTGGG CAAACATGGG AATCAGTTAC GCAAACCAGG GGATGTACAA AGAATCAATT CCGTATTATG TTCGTGCCCT TGCGATGAAT CCTAAAGCTG ATAACGCATG GCAATACTTG AGGCTCTCGT TAAGTTGTGC CTCAAGGCAA GACCTGATTG AAGCTTGCGA GTCAAGGAAT CTCGATCTTT TGCAGAAAGA ATTCCCGCTG TGAGTAGACA AAAAGCAGAC GATTTAAGCC CTAAATCCAC ATGAAAATCT TACAAGGACG TTACGTCTTT TTGTT |
| Length | 2395 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 16383800.. 16389418 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G56290.1 |
| Description | peroxin 5 |
| TAIR curator summary | Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS1- and PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions. |
| Alias | [ATPEX5][EMB2790][PEX5][ARABIDOPSIS PEROXIN 5][EMBRYO DEFECTIVE 2790][peroxin 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg484006 | Tudor/PWWP/MBT domain-containing protein |
| 5.19615 |
Ahg919661 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
| 7.48331 |
Ahg494796 | Insulinase (Peptidase family M16) family protein |
| 7.74597 |
Ahg472946 | GYF domain-containing protein |
| 8.66025 |
Ahg491603 | Protein kinase superfamily protein |
| 9.21954 |
Ahg493647 | yeast YAK1-related gene 1 |
| 10.198 |
Ahg490770 | peroxisomal ABC transporter 1 |
| 10.9545 |
Ahg482201 | LEUNIG_homolog |
| 12.6491 |
Ahg472680 | SIN3-like 3 |
| 13.7477 |
Ahg490893 | heavy metal atpase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|