| Annotation |
|---|
| Description | jgi|Araly1|939058|scaffold_503249.1 |
| Sequence |
GAAGATTAGG GTTTGTTCTA GATGTCCTAC AATCAATCAA GGCCCGACAG AAGCGAGACT CAATATCGTA GAACTGGTCG ATCCGCCGGT AACCATCACC AACAGCAACA ACAACAGCAA CACCGATCTT CTTCCGCCGC CGGTTACGGT AAGGGAGCCG GCGCTCCTGC TACTGCGCCT GCCCCTTCCA CTTACGCTGA TAATTCTTCC TTGCCTTCTT CTAATCGCAG TTTTAAGAAG CCCGGCAATG CTCAAGGAGG TGGGCAGCCT CGGGTGAATC TGCCACCTGT GAATCATCCT AACAATCACA ACAATGGTCC CAATGCACAC TCTCGCTCTC AAGGAGTGCC TGGTGAACCG GTTGTTGGTG GACCAGCCAA TCCAACTGAA TCATTCAACA GAAACACTGG ACCTATTCCA AAGGCTCCAA CTTCTCAGTC TACCGCCATG AGTTCCAAAA ACAATGAGAC GCCCAACACA GCTAAAGCCT CTGGAGACGC TTCTCAAGCA TTTGCTTTGC AATTTGGGTC ACTTGGTCCT GATTTGATGA AGATTCCTGC TCGAACTAGC TCAGCACCTC CGAATATGGA TGAGCAGAAA CGTGCCCAGA TGCAGCAAGC TTCTTTAAGA ACGGCACCAA ACGTGCCAGC TTCTGTACCC AAAAAAGATT CATCAAATAA GGGTGCTGAT AATCAATTGA TGAGGAAAGA GGGGCACAAT CCATCGAGTG AAAAAGCTGA TATCCAAGTC CCACATATAT CCCCTCCAAG TCAAACGCAG AAGTCTCCAA TTACAAATAT CCGCATGCCT TCTGTGCAGA CACCATATCA GCATGCTCAG GTCCCTCACC ATGTACATTT TGGTGGGCCG AATATGCATA TGCAGCCTCC CGTGACTGCA ACCTCATTTC AGATGCCAAT GCCAATGGCA TTATCTATGG GAAATACCCC TCAAATCACG CCGCAGGTGT TTTTTCAGGG TCTCCCATCA CATCCATCAC ATCCAATGCA TCATCAGGGT ATGATGCATC AGGCTCAGGG ACATGGTTTT GCAACTCCAA TGGGTGCTCA AATTCATCAT CAGTTAGGCC ATGTGGGTGT GGGTTTGAGC CCGCAGTATC CCCAGCAGCA AGGAGGAAAA TATGGTGGGA CACGCAAGAC CACGCCTGTA AAGATTACAC ATCCTGACAC ACACGAAGAG CTGAGGCTTG ATCGACGCGG TGACCCGTAT TCAGAAGGCG AATCAGCGGC CTTAAAACCA CATTCTAACC CACTTCCCAG ATCACAGCCA GTCTCATCAC TTGCTCCACG ACAAGTCAAT TTGGTGCAAC CCTCATATAA CTCCAATACC ATGATATATC CTCCGGTTTC TGTACCCTTA AATAGTGGTC CAATATCATC CGCTCAGGCA CCGAGATACC ATTACCCAGT TATTGATGGG TCTCAGAGAG TACAACTTAT CAACCAACCT GCTCATACTG CTCCACAGCT TATCAGACCC GCAGCTTCTG CTTATGTTTC ATCTGATTCA GCTTCCTCTG TGAAAGCACG CAATACCCAA AATGTAATGT CATCTGCTCT ACCTGTAAAT GCGAAGGTAT CAGTGAAGCC AGCTGGGGCT TCTGAAAAGC TTGGATCACC AAAAGCCAGG TCACATGGAG AAGTTAACAT TTCTCTGTCA CAAAAAGACG TGGAGGCAGG TTCATTGAGC TCTTCACAGC AGCCGAAACC TGGCTTTGTC TCTGGAGTAC CAAATTCGTC TGCTCCGCCA GAGAAGTCAT CTGTGGAGAC TGCTCCAGTT GCAACGACTG AAATCAGAAG AGCAGAAATG GTGAGTGAGT CGATCTCAGT TGAAGATCAG ACATGTAAGG AGGAACCCCC TCATAATCCG ACTGAGACTA TGCCAGACTC TCTGGTCTCT GATCCCGAAA CAAAAACCGT TGCTGCCAAG GAAAATTTAT CACTCCCAGC TACCAACGGG TTTAGGAAGC AACTCATGGA AGTGTCTCCT CCAGCTGATG CTCCAACTTT TGAATCAGTA GATACGAATA TTGACAAATC TATGGAAGGG TCAAGCCATG CCTCATCTGA GATTTCTGGT TCTTCACCGC AAGAGAAAGA CCTAAAATGT GATGAACGGA CTGTTTCTGA CAAGCTCGTT GAAAGGTCTG TAATTTCTGA TGAAAAACAC GAAACAATGT CAGGTGTGCT TGAGAAGGCA CAGAATGAGG TAGATGGTGC CACAGAAGTC TGTCCTGTCT CTGAAAAATT AGCTGAAGTT ACAGATGATA CAAGCTCTGA CCTTCCACAT TCTACTCATA TTCTGTCTTC TACTGTTCCT CTTGGACATT CAGAAACATT GTCAAGACAT CATGGTGTAG AAAATTCTGG TGATAGTTTG ACCTCTGCCC CAGCTACTCT TTCCAAAGAT AAATCTGCAT TTGAAATAAA CACGAGAAGA AATACTTCTA CAAAAGGAAA GAAGAAGATA AAAGAAATTC TTCAAAAAGC AGATGCTGCA GGGACAACTT CTGATCTCTA TATGGCTTAC AAAGGGCCTG AGGAAAAGAA AGAGCGCTCA AATGTTGTTA ATGATGTTTC GAACCAGAAG CTGGCACCTG CCATACCTCT GGCTGTTGAA GCCACTGTGG ATGCTGAACC AGTGAAAAAT GAACCAGAAG ACTGGGAAGA TGCAGCCGAT GTTTCTACAC CAAAGTTGGA AACTGCAGAT AATTCTGTGA ATGTAAAGAG AGGTTCCTCA GATGAGGTCA GAGACAGCTG CAGCAATACA GAAAAGAAGT ACTCCCGGGA TTTCCTGCTA AAGTTTGCAG ACCTGTGTAC TGCTCTCCCT GAGGGATTTG ACGTTTCCCC TGATATTGCT AATGCCTTGA TTTTTGCATA TATGGGTGCA TCACATCATG AACATGATTC ATATCCTACT CCTGGAAAGG TTATGGATCG CCAAGCAAGT GGTGCTCGTT CAGATCGTCG TCCCAGCAAT ATGGCTGTTG ATGATAGATG GACGAAGAAT CAGGGTTCTC TTCCTGCAGG ATATGGCGGT AACCTAGGTT TCCGACCTGG TCAAGGAGGA AACTTGGGAG TTTTAAGAAA CCCTCGTATG CAGGGGCCAA TTATATCTAG ACCGATGCAA CCAGTGGGTC CTATGGGAGG AATGGGCAGA AATACCCCCG ACTTAGAAAG GTGGCAACGT GGTTCCAATT TCCAACAAAA AGGACTTTTT CCTTCTCCGC ATACTCCTAT GCAGGTGATG CACAAAGCCG AGAGAAAATA CGAAGTGGGT ACAGTTGCAG ATGAAGAACA AGCAAAACAA AGGCAATTAA AGGGCATCCT GAACAAGTTG ACCCCACAAA ACTTTGAGAA ACTGTTTGAG CAAGTTAAAA GTGTCAACAT TGACAACGCT GTTACACTTA CTGGTGTCAT TTCACAGATA TTTGACAAAG CCTTGATGGA GCCAACATTC TGTGAGATGT ATGCAGATTT CTGTTTTCAT CTGTCTGGGG CGTTACCTGA TTTTAATGAG AATGGTGAAA AGATTACCTT CAAAAGATTG CTTCTCAATA AATGTCAGGA AGAATTCGAG AGAGGGGAGA AAGAAGAGGA GGAAGCCAGT AGAGTTGCCG AAGAAGGACA AGTAGAACAA ACCGAGGAGG AAAGGGAAGA GAAAAGACTC AAGGTGCGGA GGAGAATGCT CGGTAATATC AGACTTATTG GTGAGTTATA CAAGAAAAGG ATGTTGACTG AGAAAATCAT GCACGCATGC ATCCAGAAGT TGCTCGGGTA TAATCAAGAT CCACATGAAG AGAATATTGA AGCTCTGTGT AAACTAATGA GTACGATCGG AGTTATGATC GATCATAACA AAGCCAAGTT CCAGATGGAT GGATATTTTG AGAAAATGAA AATGCTATCA TGCAAACAAG AATTGTCTTC TAGGGTGAGG TTCATGTTGA TTAATGCCAT CGATCTGAGA AAGAACAAAT GGCAGGAGAG AATGAAGGTT GAAGGGCCGA AAAAAATTGA GGAAGTGCAC AGGGATGCTG CACAAGAACG CCAAACTCAA GCTAATAGGC TTTCACGTGG ACCCTCGATG AATTCGTCAG CAAGAAGAGG GCATATGGAG TTTAGTCCTA GGGGAGGAGG AGGAATGCTA TCACCTCCAA GTGCCCAAAT GGGTGGCTAC CATGGACCAC CTCATGGTCG TGGCTTTAGT AATCAGGACA TTAGATTTGA TGAAAGGCCA TCTTATGAGC CTAGGGTGGT TCCAATGCCT CAAAGGTCAG TAGGTGAGGA GCCTATTACC TTGGGTCCGC AAGGTGGTCT TGGTCAGGGA ATGTCTATGA GAAGGCCTGC AGTAGTATCA AACACTTTTC AGTCTGATGC TACTCAGGCC GGTGGTGGAG ATTCTAGGCG ACCGGCCGGT GGTTTGAATG TATTTGGCTC ACATAGACCT GCAAGTCCTG TTACTCATGG AAGGTCAAGT CCTCAAGAGC GGGGAACAGC TTATGTTCAC AGGGACTTTG CAAGTCTGTC GCGTACTTCT GATCCGTCAC CAGAAGTTTC ATCTGCTAGG CAAGTACTAC AAGGGCCATC ATCTACAGTA AACAGTCCTC GAGAAAATGC TTTGTCTGAG GAACGGTTAC ATAATATGTC ACTGTCTGCA ATTAAGGAAT ATTACAGTGC CCGAGATGAG AATGAGATTG GTATGTGCAT GAAAGATATG AATTCGCCAG CTTATCACCC AACAATGATT TCTCTCTGGG TAACTGATTC GTTTGAGAGA AAAGACAAAG AAAGGGATCT CTTAGCAAAG CTCCTTGTGA ACCTCGTGAA ATCTGCTGAC AACGCCTTAA CAGAAGTCCA GCTAGTGAAA GGGTTTGAAT CTGTTTTGAC AACCCTGGAG GATGCTGTAA ATGATGCTCC AAAAGCAGCA GAGTTTCTTG GTAAAATTGT TGGTAAAAGT GTGACAGAGA AAGTAGTGAC ATTGACAGAG ATTGGTCGGT TAATACGGGA AGGAGGAGAA GAACCAGGAA GTCTGATAGA GTTTGGATTA GGCGGTGATG TTCTTGGTAG TGTTTTGGAG ATGATAAAGA CAGAAGCAGG AGAAGAAGCG TTGGTTGAGA TTCGCCGGAG CTCAGGTCTG AGGATTGAAG ATTTCAAACC TCATGCACCT AACCGGTCTA AGATATTAGA GAAATTTACT TAGGAAAAAA AAAATGGAAC CAT |
| Length | 5243 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 18680650.. 18687241 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G60240.4 |
| Description | eukaryotic translation initiation factor 4G |
| TAIR curator summary | protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication. |
| Alias | [CUM2][EIF4G][CUCUMOVIRUS MULTIPLICATION 2][eukaryotic translation initiation factor 4G] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg474140 | target of rapamycin |
| 3.87298 |
Ahg929571 | lipoamide dehydrogenase 2 |
| 6.16441 |
Ahg479762 | FRIGIDA-like protein |
| 11 |
Ahg474074 | Phosphatidylinositol 3- and 4-kinase family protein |
| 11.8322 |
Ahg473977 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase |
| 14.0712 |
Ahg489923 | UBX domain-containing protein |
| 15.2971 |
Ahg472680 | SIN3-like 3 |
| 16.4317 |
Ahg474459 | phosphoenolpyruvate carboxylase 1 |
| 17.0294 |
Ahg477305 | DEAD/DEAH box helicase, putative |
| 19.2094 |
Ahg482666 | glucan synthase-like 8 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|