| Annotation |
|---|
| Description | jgi|Araly1|473514|fgenesh2_kg.1__3468__AT1G33410.1 |
| Sequence |
ATGGAGGAGA ATCGTCGGAA TTCGTTTGCC GGTATGGAAG TTCCAATTGC CGGCGGCGGA AATGTCGTTA AATGGATCGA GATATCTGTG CCTTCACCAT CTGTTTCTTC TTCTAGTATC GGTGCTAGTT CAAGTGAGGA CAATGAATGT GTTCAGCTTC CTTCGTATGA AGATTACGCT TCTAGCTCTG TAATTGGAGA ACCTCCGATC TCTTTCGTTT GGACAATCAA CAAGACGAGT CCTAATGCTC TCGAGCTTCT TCAGCTCTCT GCTAAATCGG GATTCCCAAT AACTGGGCTG CGTTTCCTTT TTGCTCAGAC TCTTTCTCCT TTTGCTTTTG TATACGCCGA TAAGGGTAGT GATAGTGGTC GTCTTGTCTA CTTTCTTTAC GCTCTCACGC CGTCTGGTGT TGTCTACGTT CTGAAACTAT TGAATACGTC AGCCTATAAG TCTGGCTCAG TTTTCCCGGT TGATCATCTG ATTCACTTGG ATGTTCGACC TTACTTGAAC GAGACTCGTG CTACTAGTGT TGCTGCATTG CCTGGTTTCA TTTTTCTCGG GAGGTCTGAT GGTTGTGTCT CTTGCTTCCA ACCTGTTGTG TATTTTCAGA AATCATCAGG ATTCCACCAG GAGCTGCGTG ATGATACTGG GTTTGGTCGT CTGGGGACAG TGGTTGCAGC CGTACAAGAT TTATTTATAT CAGAAGTTCA TGGAAGAAAT TATATATGTG TGCTTCATGC TGATGGGGCA TTACGTGTTT GGGATATTTT GACTTATAGC AGGGTTTTAT GTCAGAGTAT AGCTGCTAAG AACCTTGAGG GGGTTATGTG TGTGAGGTTA TGGTTGGGCA AAGCTGATTA CGATTCTGGA ATCATTCCAT TAGCCGTCTT GTATAGAAAG AGTATGGATG ATAGCATGGA CGTGATCACT GTATATGGTC TGCACTTTAG TTCTGGGGAG GGGATAGCTT TGTCTCTAGA TTCTGGATTA CAGAATATTC CACTGGAAGA GGGGGAATTG CGGGATGTCA GATTTACGTC CGACAAGATC TGGACTCTAA AGGCCGATGA ATTGACATCT CACATGTTGT TCCAGAAATC TAGCACTATG GAAGCACAGT CTTACACTTT GCAGGAAGAC TACATTTCTG AACAGCTATT TCTAAGTTCT AGGAGCTCTT CACAGGATCT TCTTTTGACA ACTCATTCAC TGTTTTCATC CGTAAAGGAT CAAATTATGG GATTCATTTC GTCGATCTTC TTACGCAGGC TTCTTTGTCC TGGAATTTTT CATAATGTTG CCTTGCGTCT AACTTTACTA GACCACAACA AACACTGGAC TGATTCTGAG TTTCAGTCTT TAAGTCTTGA TGAGCTTACA AGCGAGATTC TTTTACTGGT TGAGCATGAG TCAGATGTTA TTGGTTTAGT TAGAAACAAT TCTGTATCAT TGTTTTTTAG ATTGGAGAAC GCTGAGCACA GCCTTGGAGG TTCTTCCTCC GAACACAGCA ATCTGACAAG CTTAGGCTTG GGTGTGTCTC ACAATGAACA TGAAATTCTG GCAGAGGTAC TAAGATGTAC TTCGAAGATC AGTAAACAGT GGGGTGGTGC TCCTTATGCC ATGTATTATG AATCAATTAC TGGAAAGCCA GTTATCTCAT CTGATGAAAT TGTTCCTCGC TTAGTTAACA TCCTTGAGTC GGGATATTCT ACAACCATAG GTCAGCGTAC TTGGTCAGAT CTTGGTGCTG ATAGAGCATG GGAAAAAGAG CTAGAAGCTC ATAAAAATCT TAGAACATTC TCCATTGACA TGCTATTGTC TCTCTCTGCT CTATGTCAAA GGGCTGGATC TTGGGAAAAA GTTTTTACTA TCATGGAGCA CTATTTGCAG TATTTGGTCC CTAAGAAATC TATGCAAGAA AATGATGGTG AGGCATTATC TGATATCTGT AGTTCTATCC TCGTCCAAGC AACTTCTCAG TTTGTAAAGG TGATGTTTGA GTCAGCATTT GACATCTTCC TACTGGTCAG CTATCTGCTT AACATTGCTG GACAGGTTAA TATGTCACAG CAAGACATGT GCAAGCTACG GCTTGAGTTG CTTCCGATGA TCCAAGATAT TGTCTCAGAG TGGCTCATTA TCCTTTTCTT TGTTACCACT CCAGCTGAGT CAACTTCTAT GGAAGATTTC AGCTCGAAAC TTTCATCTCT ACAGATTGAT AGCAGCATTG ACAAAAGATC ATGGAACGCA ATGCTTGGGA AATGTGGTTT CTCATTGGCG TTTATTCTTC TCTTTAGTGA CCGAAGTTGC ATTGTGGACG GCCGCTTTAA CTTGAGATAT CTTCCGAGTT CACAAATCAT TACAAGTTTG GTGCAAAACT TTATCAGCTG GATTCGTTAT AGTAAAACAG GAGAGGAGTC TTCTTCACTG CTAAGACGCT CCACTGAGCT TAGTCTTAGG TTGATTAGGA ATGGACAATC TGATGCTGTT GAGCGAATCC TTGTGGTTGT GGAGGCAAGT TTACGTGGGG AGAAAACATT TGGATGTTCT CAAGATACTA GTGGGGATTG GTGTCTTCTT CAACATCTCC GTGGTTGTTG CCTTCTTGAT CAAGTACAAC GTGGGGCATG CGGCATATTA AGAGAGAGGA AGATTATTGA TGCCATCCGC TGTTTCTTCA GAGCTTCATC AGGTGAAGGA TCTTGGAAGG CTTTACACAG CCTGTCTAAA GAAGCAGGAT TTTCACCTGC GACAACGGGT CCCAGTATTT CAGATGGTTC TATGTCTTGT GCGACATGGA AACTTCAGTA CTTCGAGTGG GCTATGCAAA TTTTTGAACG GTACAATATA AGTGAAGGAG CTTGTCAGTT TGCCTATGCA GCCCTTGAGC AAGTAGATGA GGCCTATGAT TTCATAGAGA GGACTGAGGA ATTCGATCTA ACTAAAGCAG CCACCGACAC TAGAGGACGA CTGTGGGCAA ATGTTTTCAA GTTCACCTTA GATCTGAATC TCTTGAACGA CGCTTACTGT GCTATAATTT CAAACCCTGA TGAGGAGATT AAGCGCATCT GTTTGAGGCG CTTCATAATT GTTCTATTTG AATGTGGCAA AACAAAGATC CTCAGTGATG GACATCTACC TTTCATCGGT CTAACAGAGA AGATCACCCA AGAGCTTTTC TGGAAGGCCG GACGTTCTGA AATAATGATG AAGCCAAATC CATACAAGTT GCTTTATGCG TATGAGATGA GACGACACAA TTGGCGAATG GCGGCAAGTT ACATGTATCA GTTTTCTGCC CGTTTGAGAA GCGAGGCTGC ATGCAAGGAT TACAAACACA TGTCCCTAGT TTTGCAAGAG AGGCTTAATG GACTTTCTGC TGCTATTAAT GCATTAGCCC TTGTTCATCC TGGGTATGCT TGGATTGATC CAGTACCAGA AGAATCCACA CGTTATCCAG TTAAAAAGGC TAGAAGAGCA GAAGAAGAAC AATTAAGGAG TAATGACAAA GGGGAGCAGA GTTGCATTGA TATCGAGAAA CTTCAAAACG AGTTTGTTTT TACTACTGCT GAATATATGC TTTCTCTGAA AAATTTCGGG TGGACATATT CAGGACTCGA AAAGCCACCA TCGGATTTGG TTGACCTTCT TGTCCAGGCA AACTTGTATG ACATGGCATT CACTGTTGTT TTAAAATTTT GGAGTGGCTC CGCTTTGAAA AGGGAGCTGG AGAAGATATT TGAGAATATG GCAATTAAAT GTTGCCCTGC TAAAGGAGCG CTGTGGACAT CGCCTAATCT TATGTTAATA TCTAACGATG AAGAAGTTAC TCATTCGCCT GATAGAAGCC CTGCTGTTCA GGGCTCTAAG TTGGCTGGTG ACTGGGAAAT TCTTGAGGTT TATCTGAAGA GGTACATAGA CATACACGCT AGACTACCGG TTTCTGTTGC TTCAACCCTT CTTCAAGCAG ATTCTTGTAT CGAATTGCCT CTCTGGCTGG TTCAAATGTT CAAGGACGGT CAGAAGGAAA AAGCTTTGGG AATGGCTGGG AAAGAAGCAA GTCCTGCTTC CTTGTTTCAG TTATATGTTG ATTATGGGCG TCTTACAGAG GCCACTAATT TGCTACTGGA GTACATGGAA GCATTTGCAT CATCGAAACC AGCAGAGGTA TTGAAGAGGA AAAAGGTATC AGGAGTTTGG TTTCCATACA CAACAGTAGA AAGACTATGG TGGGAGCTAG AGAAAACGAT GAACTCAGGA CGGATGGTGG AGCAATGTCA TAAGCTGAAG GAACAACTCC ATCATGCATT ACTCAATCAC TTAAAACTGC TAAAGGTGGA CTCAAATGAT GCTGTGTCGT CTGCTACAGG TTAAAGAAAG TCTTGTTTGA TCCGTGTGAA TATTATAATC TGTATGAAAA ATCGTATCAG GCTTTTAAAT TCTCTTAACC AAATCCAACC GGTT |
| Length | 4464 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 14645981.. 14655282 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G33410.1 |
| Description | SUPPRESSOR OF AUXIN RESISTANCE1 |
| TAIR curator summary | |
| Alias | [ATNUP160][NUP160][SAR1][ARABIDOPSIS NUCLEOPORIN 160][NUCLEOPORIN 160][SUPPRESSOR OF AUXIN RESISTANCE1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.48074 |
Ahg487351 | E3 ubiquitin ligase, putative |
| 7.34847 |
Ahg908068 | Zinc knuckle (CCHC-type) family protein |
| 12.49 |
Ahg324031 | phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) |
| 13.4164 |
Ahg495010 | prefoldin 3 |
| 14.5258 |
Ahg495674 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 15.4272 |
Ahg348567 | dentin sialophosphoprotein-related |
| 21.2368 |
Ahg929163 | DNA binding;DNA-directed RNA polymerases |
| 24.98 |
Ahg929889 | pre-mRNA-processing protein 40C |
| 25.4558 |
Ahg476762 | Pseudouridine synthase family protein |
| 26.8701 |
Ahg480544 | GLN phosphoribosyl pyrophosphate amidotransferase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|