Detail



ID : Ahg485927

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485927|fgenesh2_kg.5__1919__AT3G55070.1
Sequence
ATCAATCAAT CAAGATCACC ACCACAAGGC AAAATCTAAA CTCTCTCTGC GAACTTTGTG CTAACTTCTT TCCCCATTTT CTTGCCATGG AAATCGATTC CGCCACCAAC GGAAACTCTG ACGCCGTCAT GACGGAATCC ACCGCTACGA TCACTCCGTC GCCGGTCGTC GTCCCGTCTT CGAGATCGAA TCAATTTACT GAATCGCTCA AGCTTGAGCA CCAGCTCCTC CGCGTACCTT TCGAGCATTA CAAGAAGACG ATCCGTACCA ATCACCGTTC TTTCGAGAAA GAGGTATCAA CTGTTGTTAA CGGCGTCGGA GAATTGGCTG ATTCCGATTG GTCTAAAGAC GCCACCGTTT CGCGTCTTAC TAGCCTTGTT ACTCGATTAC AAGGCCTCAA ACGAAAGTTG GAAGAAGGGA GCAATGTGGA GAATTTACAA GCCCAGAGAT GTCGTGCTCG CATCGATCAT TTGGATTCAG TAGATGTGGA AAATATTACT GAATGGAACA ATACAAAACT GAAACGGATT CTTGTGGACT ATATGCTGCG GATGTCATAT TTCGAGACTG CTACAAAGCT TTCAGAAAGC AGCAATATTT TGGACCTTGT CGACATTGAC ATATTTCGAG AAGCTAAGAA GGTGATTGAC GCCCTTAAAA ATAAGGAGGT AGCTTCTGCA TTGGCATGGT GTGCTGATAA TAAAACCCGG CTGAAAAAGT CAAAGAGCAA ATTTGAGTTC CAGCTAAGGC TGCAAGAATT CATTGAGTTG GTACGGGTTG ATACAGCTGA CAGCTACCAA AAAGCAATCC AGTATGCTCG AAAGCATCTA GCATCATGGG GAGCAACCCA TATGAATGAA TTGCAGCATG TCCTGGCCAC TTTGGCTTTT AAAAGTACTA CAGAATGCTT AAAATATAAG GTTTTGTTTG AACCACAACA GTGGGATGTT TTAGTTGATC AGTTTAAACA AGAATTTTGC AAGTTATATG GCATGACAAT GGAACCCTTA TTGAACATCT ACTTACAAGC AGGCTTGTCT GCGCTGAAAA CTCCATATGG TTTTGAAGAA GGTTGTACCA AAGAGGACCC GCTCTCACAA GAGAACTTCC GGAAGCTAGC TTTGCCTTTA CCGTTCTCCA AGCAGCACCA TTCAAAGCTT GTTTGCTATA TTTCTAAGGA GCTAATGGAC ACAGAGAACC CACCACAGGT GCTGCCCAAT GGCTACGTCT ACAGCACCAA GGCTCTCAAG GAAATGGCGG AAAAGAATGG AGGAATAATA ACATGTCCAA GGACAGGGCT TGTCTGCAAC TACACGGAGT TAGTTAAGGC ATATATATCA TGAACCCACA TGCTCATAAT CCTCACTTTG GTCGCCTTTT CAACGGATGA CTGGGAAGTC AGTATTAAGG CCAAAGAAAC TGAAAATTCC AACTTTCTCC ATTACTAGTC TTTGTGAATA TGCACTTACA GATAAAACTT TGCATCACTT AGTAGAAACA GCTCGTTCCT TTGTATATCA AGCCATTTCT TCATTTCAGT CTTATGACAA TTTTCTAGTC AACATGGTTT TAGGTGAAGC ATGTTTGCCT GCTTTGCTCT G 
Length1601
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16350044.. 16353252
Download Sequence
A.thaliana
AGI-codeAT3G55070.1
DescriptionLisH/CRA/RING-U-box domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg487751 CD2-binding protein-related
3 Ahg473569 Pseudouridine synthase family protein
6.7082 Ahg496397 Embryo-specific protein 3, (ATS3)
11.8322 Ahg936878 Transducin family protein / WD-40 repeat family protein
13.4164 Ahg492127 hydroxyproline-rich glycoprotein family protein
22.5832 Ahg482806 chaperone protein dnaJ-related
25.0998 Ahg473343 zinc finger (C2H2 type) family protein
26.4953 Ahg481449 hydroxyproline-rich glycoprotein family protein
31.749 Ahg943524 CTP synthase family protein
32.7261 Ahg474017 associated molecule with the SH3 domain of STAM 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression