| Annotation |
|---|
| Description | jgi|Araly1|482793|fgenesh2_kg.4__1853__AT2G37860.3 |
| Sequence |
GGCCCTAATC ACTCTTGCAG TCACCACTGT CTCCGTCTCT TCTTCTCCTT CGTTGGGACC ATTCCTCCTC TTTCAGGCCA GATTCAAGAA GAGGACAATG GCAGGATGTG CAATGAATTT TCAGTTCTCG AGTGTTGTGA AAGTGAGAAA CGAGATCTCT TCTTTAAGGA TTTGTAATCG AGACTTTGTA TTTAGAGATT TGGCCAAGGC AATGAAAGTG CCTGTTTTGC GGATTAGAGG TGCTTCAGGA AGGCAAAGGT CGAGGCTTTT GATGGTTAAT ATGTCTCAAT CTCCTGTTGA ACCGCAATCT GGTGTATCAG TTACCGAGCA ATCGAAAGGA GAAGGTGATG ATAGTATCTT AGGGAAAGAC AATGTTAGAA ACTTGGGAAC TGATCAGCTT GAGAATTTGG ATCATGATGG TAATGTAGGG GATGGCTTTA ATGGTAATGA TGGTAATGGG GGCAGTGGAG GAGGTGGAAA TGGAGGAGAA GGTGATGGCG AAGGCGAAGA TTACGAAGAA AAAGAGTTTG GACCGATTTT GAAATTTGAA GAGGTCATGA AGGAGACTGA AGCTCGAGGA GCTACTCTTC CATCTGATAT GTTGGAAGCT GCTAAGACTT ATGGGATCCG CAAAGTGCTT CTCCTTAGGT ACTTGGATTT GCAGAGCTCA GCTGGGCTGC TTGGGTTTGC TATAAGATCA TGGGCTATGC TTCGAAACAG AATGTTGGCT GATCCATCTT TCCTCTTCAA AATAGGGGCT GAGATAGTCA TTGATTCTTG TTGTGCCACT GTTGCTGAAG TTCAAAAGAG AGGGAAGGAT TTCTGGGCGG AGTTTGAGTT GTATGTTGCT GATCTTTTAG TTGGAACTGT GGTTAACATT GCTCTGGTCG GTATGTTGGC GCCTTATGTT CGTTTTGGAC AACCATCCGC ATCACCTGGC TTCTTAGGAC GAATGGTTTT TGCTTATAAT GCGCTTCCTA GCAGCGTGTT TGAAGCTGAA AGGCCAGGAT GTCGATTTTC CGCTCAACAG AGACTTGCTA CATACTTCTA CAAGGGTATA ATGTATGGTG CAGTTGGATT TGGATGTGGC ATCGTAGGTC AAGGCATCGC AAATCTTATC ATGACTGCTA AACGAAACAT AAATAAATCA GAAGAGAACA TCCCGGTACC ACCGCTAATC AAGAGTGCAG CTCTCTGGGG TGTATTCTTG AGTGTTTCTT CGAATACTCG TTATCAGATC ATCAATGGTC TAGAGAGAGT GGTCGAAGCA TCACCTTTCG CCAAGAAATT GCCTCCGGCG GCTATGGCCT TCACAGTTGG TGTACGGTTG GCCAATAACA TCTACGGTGG TATGCAGTTT GTGGATTGGG CAAGATTGAG CGGTTGTCAG TGAAAACAAC CAAAACTCTT CTTTGTGTGT CTTATTTGAT GAAACCATAT AATGTTGTAG CCTACTCATT TCGATCTGTT TTACTACGTT TCCGTTGTTA CTATAATATC CAATAATAAG AAATTTCAGC TCG |
| Length | 1523 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 17366748.. 17369084 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G37860.3 |
| Description | Protein of unknown function (DUF3411) |
| TAIR curator summary | Encodes a protein of unknown function. Mutants have pale leaves, lower cell density in the palisade parenchyma and increased sensitivity to ozone and virulent Pseudomonas syringae |
| Alias | [LCD1][LOWER CELL DENSITY 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg473708 | isopropylmalate dehydrogenase 1 |
| 12.7279 |
Ahg472287 | Spc97 / Spc98 family of spindle pole body (SBP) component |
| 15.2971 |
Ahg479235 | transcription regulatory protein SNF5, putative (BSH) |
| 17.3205 |
Ahg473372 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 21.9089 |
Ahg940287 | serine carboxypeptidase-like 35 |
| 26.096 |
Ahg928005 | |
| 26.2679 |
Ahg477286 | Major facilitator superfamily protein |
| 26.6833 |
Ahg484318 | aminoalcoholphosphotransferase |
| 28 |
Ahg477223 | alpha/beta-Hydrolases superfamily protein |
| 28.1425 |
Ahg945400 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|