Detail



ID : Ahg478940

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478940|fgenesh2_kg.3__1641__AT3G15095.1
Sequence
GTGATTAGTC AAAGATGATT ACATAGATTT AGGAAGAAGG AATCTCTCTT ACCCTAATCA GATCCAGGGG TATTTTAGTA AATTATCATA GGGACCCCCC TAAGTCTCTC TCGATTCCGT TACACTCTCA ATATCTCTCT CCAATGGCGA TGGTTACTAC TACACTCTTC TTCTTCTTCT TCTCACTGTA AAAAAAGAAG AAGCAAAAAA AATGGCGGAA ACTGAGAGAC CCCACCGTTC TTCAAGTATT AACAGTAGCA GCAACAATGG TTCTTCTACC GATCTATTCA TTTGTTTCAC ATCTCGTTTC TCTTCTTCTT CCTCTATGCG TCTCTCTTCC AAATCCATCC ATAGTCCAGC TCGTTCCGCT TGTCTCACTA CTTCTCTTAG CCGTCGTCTC CGTACTAGCG GTAGCTTGAA GAACGCTTCA GCCGGACTTT TGAACTCTCC GATGTTTGGT GCTAATGGAG GACGGAAGAG ATCTGGATCT GGTTACGAGA ATAGTAGCAA CAACAACAAT AACATAGAGC CGTCGTCTCC GAAGGTGACG TGTATTGGTC AAGTTAGAGT GAAGACTAGG AAGCATGTGA AGAAGAAGAT GAGAGCTAGA TCTAGGAGGA AAGGAGGTGA GTCGAGTTTT AGGAGATCCG TTGATCAAAA CGACGGTGGT GGTGGTGGAG GTGGATGTCG TTTTGATGCG AGTGAGAATC GTTGGGTGCA TCTTCCGGTG ACTATCTGCG AGTCGTTGAG ATCGTTTGGG TCTGAGCTCA ACTGCTTCTT CCCTTGTAGA TCTTCGTGTA CGGAGAATAG TCATGGAGAT GGGAGGCGAG TTGAGAGTAA CAACGACGGT TGCGGCGGCG GAGGAGGAGG AAGTTCGTGT GGTGCGATGT TTACGAGGTG GTTTGTGGCG GTGGAGGAGA CGTCGGGTGG GAAGAGAAGA GAGATTGAGC TTGTAGTTGG TGGAGAAGAC GAAGTGGAGG AGGATAGGCG GAGGAGTCGT CGGAGACATG TTTTCGAGGG GCTTGATCTG AGTGAGATTG AGATGAAGAC GGAGAAGAAA GAGAGAGGAG GAGAAGAAGT TGGACGGATG AGTATTTGTT CTCCGCCGAA GAATGCTTTG TTGTTGATGC GGTGTAGATC AGATCCGGTT AAGGTGGCGG CGTTAGCTAA CCGGGTTCGT GAAAGACAAT TGTCGTTAAA CGACGGCGTA TACGGAGGAG GAACAGAGGA GGAAGATGAT GAGAGAAGAA GAAGGTTTGA GCTGGAAATT GAAGATAAGA AACGGATCGA CTTGTGTGAG AAATGGATCT CCGGTGAAAC TAATGTGGAG ACAGAAGAAG TTTCAGTTAC AGTTGCAGAA GCAGAAGTAG AAGTGCCTTT GCCTTCAAAT CCAGCTACAG AGGAAGAAGA AAGAGTCAAA GCTGTTGAAG ATTCGATTGT TGAAGAAGAA CAAGAAGACG AAGCTTCGAA AATTCTGGAT TCGGTTGAGG AAGAAATTGA AGCTACGATC ATGAAAAACA TTGAAGACGA AATCAGAAAC GCTATAGAAG AAGATGAGAA ACTGGCTGAG ATGGAAGAAT TAGCGGCGGT GGCGGTGGCT GAGACGGAGG AGGAAGAAGA AAACAAAGAG GTTGCTGTTG CTGCCTGTAT AACTCAAAAT GAGGAAAGAT CCGAACAAGG AAACCGAGAA CCCGACCCGA GTCCGGAAGT GGTGATGAGA AGAAGTCTAC AAGAGGAAAA AACGGAGAAA GAGAAGGCGA CGCCGTATAA GGTGTTACCG GATTGTTTGC TGCTAATGAT GTGTGAACCA AAGCTATCAA TGGAAGTCTC TAAGGAGACT TGGGTTTGCA GTACAGATTT CGTCAGATGT TTACCAGGAA GACCTCCGGC GAAGAAGATA CCTCCAGAAG CTACCGGAGA TAATCATCAT CATCATCATC AACCCAAGAA GCGGATCGTC ACGGCCGTTG ATTCCAACGC ATCTTCTCGC CGGCGGTCAA TCGATAAACC ACCCTTACAC CTTCAGCCGC CACGGTCATC GTGTTCATAC CCAGCAGCTC CACCGATAAT AACGGCAGCT GCGGCGGTTG GGGAACAGAG GGTAGCCGGA GCTAATAAGG CGTACGAGCC ACCAGTGCTG CCACGTTGCA AATCGGAGCC GAGAAAGTCA GCGTCGAAGC TAGCGCCGGA AGCTTGTTTC TGGAAAAATA GGAAGCTCGA GCCACACCCT CCGGCAACCG TCGGAGTCGG CGGTGCCGGA GTAGGGTTCT AGAAGAAAGG GGACGTGAGT GGGAATAAAG 
Length2300
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5966660.. 5968955
Download Sequence
A.thaliana
AGI-codeAT3G15095.1
Description
TAIR curator summary
Alias[HCF243][high chlorophyll fluorescence 243]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg932396 Leucine-rich repeat protein kinase family protein
4.24264 Ahg475455 shaggy-like kinase 42
5.47723 Ahg492054 COP1-interacting protein 7
5.65685 Ahg901275 urease accessory protein G
9.48683 Ahg316462 auxin-like 1 protein
10.0995 Ahg492673 Peroxidase superfamily protein
10.6771 Ahg475111 O-fucosyltransferase family protein
12.8452 Ahg488531 Plant protein of unknown function (DUF827)
17.4929 Ahg491849 phytochrome-associated protein 2
18.7083 Ahg473708 isopropylmalate dehydrogenase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression