Detail


ID : Ahg473949

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473949|fgenesh2_kg.1__3903__AT1G48110.2
Sequence
CTCTCTCTCT CTCTCCAACC CCTCTTCTCA ATCTAGGGTT AGGGTTTCGA TTCTGCAGAG GGTTTTTTTT CAGCCCTCTT TTCATAAGCC TTGTTCTCTC TTCTTCTTAA TTCGAAGAAC TTCATAGTCT AAGCATGTCG TGATTATCCC AAATTTCTGG TAAATTTGAT TTCTGCTAAC TGCTACTCTT CATTTCATTT TGAATTCGTC TTTGCGTTCG AATTATTTCA AGCAATTAGC TTCATCTTCG TGTAAATTTC AATGTTTTAG GATTTGATTT GGTATCATAA GGAACATGTT TTTTCTCGTG ATTTTGCATC TTCGGTCAAG TTTTTCTGGG TTGGTTTCAT GTCTCCTTTA TTCGCTTCAC GTGAATTTGA GTGTTGGTTC AATTGGGAAG TTTTTGTATT GCAAAAGAAT CTCTGAATTT TTTATTTTTC TGATATAACT TTCCAAGGTG ATTAATCTTT GAGTCCTAGT GTTGTAGCTA AGTTGTTTAA GTTTGACCTT ATTTCTTCAA ATCAATTGCC ACAAATTTGT TAATTTCAGG TGTTTATTCA AACTCCATTG ACACAAACAT TTTCTTTGAT AAGTTAAAAG CAATGTATAC CTCCGAGGGA GCCCCTGATT TTGTTGTTGA CCAGGGCATG TATTACCCCG TTGATGCCAG TTATGGCTAT TACTGTACAG TTTATGAGTC ACCCGGTGAT TGGGAGAACC ATCAGATGTT TTTTGGTGTA GATGGTTCAG AAGTCCAGTA TACGGGTGGG CAGAATGAAA ATTCTCCCTA TATATGCTAT ACACCTAGTT ATGGATATGC ACAGTCTCCT TACAATCCAT TCAATCCTTA CATACCTGGC GCTGCAATAG GCGTTGATTC TCCTTTTGTT AGTCCTCAAC AGTTTTACTC TATTCCTCCT TTCCAGAGTG TTGCAACGTC ACCTACGTTT GTTCCATATG CAATTCAAAC TGATATTACC TCGAATAGCT CAACAAACTC TTTGGTAGAG ACTGTTTCAG CTAATAGGGA TCGATCCGAT GGGAGAGGGT CCAGGCAGAG AAATGGCACC GCTACTGGTG GGCTTCAAAG GAATGCTCCA AAACTTTCTG CAGTGAACTC TTCGGGCAAG ATCTCTGAGA AACCAAGGCC TAACTCTGGA CAAAGCAGAC AGCCAGAAAT GGACAAGAGT GATTCTACTT CGTCATCAGG ACAAGCTCTC CAGGGAAGAG CTACCTCCGT CAGTAGTACT CAACCTGTTG ACGTTGTTTC TAGTAGCAGA GTATCGTCTT TTGGGCAATT AGACATTGCT CCACCTGAAC TTAATGGTTT TTCAAAAATT GCAACAAACA ATAACAATCT TCGGCCCAAG CTGTATGGTG GCCATGCAAA TATAATTCCT GATACAGTCC GTGAACAAAA TCGAGGTCGA AGATCGAGAG CATTGGGAAA TCAACTTATT GTTAAGGCTT ATACAACAAA AGCTGGAAAT GCTGATGCCG AAGGAAATAT TGTGATCAAT CCTTCTCAGT ATAATAAAGA GGATCTCCGA ATCGATTACA GCAATGCCAA GTTTTTTGTG ATTAAATCGT ATAGTGAAGA TGATGTTCAC AAGAGCATCA AATACAATGT TTGGTCATCA ACTTTGCATG GGAACAAAAA ATTGCAGAGT GCGTATGAAG ATGCTCAGAG AATAGCCGCC GAGAAGTCTT GTGAATGCCC GATATTCTTG TTCTTTTCTG TCAATGCCAG TGGTTTGTTC TGTGGCATGG CTGAGATGAC TGGTCCAGTT TCTTTTGATA AAGACATGGA TTTTTGGCAG CAAGACAAAT GGAGTGGAAG CTTTCCCGTC AAATGGCACA TCATAAAAGA TGTTCCCAAT AGCTATTTCA GGCACATCAT ACTACAGAAT AATGAAAATA AGCCGGTCAC CAACAGTCGA GACACACAAG AGATAATGCT GAAACAAGGT CTGGAAGTGC TAAAAATATT TAAAGATCAT ATGGAAAGGA CTTCATTACT AGATGATTTT GTCTATTACG AAAGCCGACA GAGAGTCATG CAGGATGAGA GAACCAGGCT GCCGTACAGG ACCTTTCTTA GCCCTTTACC ATTACCCAGA CCAGATCTCT CTGATAGAAA CAATAAAATC CCCTTGGAAG CCTTCAAGAG ACCTTCAGTG AGCTCTGCAA AAACCAAGGA GGTTCGTTCA AAGTCAGATG GGAATGAGGA GACCACTGTT AAGGAAGTCA ATGAAGAAAA TACTTCTTCC ATTCAGAAGA AGATCAGCTC TCTCACCATT GACCCGAGTG GTACAGACTC TGACCCGACC ACTGTTTCTC ACCTGAACCA GAAGAGTCAA GCCAAGTCTA AACCGACCTC CTCAGGCTCT CTCAAGAAGA CAGACTCCTC GGAAGTGGTT GATGCTTCTC TCTCTGATGA AAATGACACT GTCAAAGTAG GATCATTGCC TATAAAAGTT ACCGGGTCTC CTGCAATCTT AACAGTCGGT ACTATTCCTC TGGACCCCAA GTCACTTCAG AAGTAAAACA CCCCTCTCAA AAGTCTAAAG TTAATCCTGC GTCATCATAC AAGCCAATGT GGTATGCAGA GAGGGTTCTG TTTGTATAGA TGAGTCTTGA CTGGTGACCT GATAATCCGT GATTTGATCA AACGCCAAAA AGAGAATTGT TGCGGTTTGC GGTTAGTGGT TGTGTTTCGG TTATTTTGGA TGTGGCCTGA GAGAGCTGTT GTGTTTTTTT TTGTTTGTTT GTTCCTCCCA ACTCAAAGAG TTTCAAATTG AAT
Length2803
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT1G48110.1
Descriptionevolutionarily conserved C-terminal region 7
TAIR curator summary
Alias[ECT7][evolutionarily conserved C-terminal region 7]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg484066 O-fucosyltransferase family protein
8.30662 Ahg495650
11.3578 Ahg476521 hydroxyproline-rich glycoprotein family protein
15.8114 Ahg350338 SPOC domain / Transcription elongation factor S-II protein
25.4558 Ahg488375 RNA-binding KH domain-containing protein
33.8083 Ahg495202 splicing factor-related
36.0555 Ahg487909 Protein of unknown function (DUF1336)
43.9318 Ahg490741 Tetratricopeptide repeat (TPR)-like superfamily protein
45.299 Ahg487419 splicing factor-related
45.9891 Ahg494105 NagB/RpiA/CoA transferase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression