| Annotation |
|---|
| Description | jgi|Araly1|476521|fgenesh2_kg.2__1651__AT1G73840.1 |
| Sequence |
CAGGTTAATC TCGGTAGCGA TTACCGACGA GAACCATGGC GGGTAAGCAG ATCGGCGGAG ATGGCGGTTT ACCGGCAAAT CTCGCCGGAA TGACAAAAAG TCAGCTCTAC GACATTATGT CTCAAATGAA GACGTTGATT GATCAAAACC ATCAACAAGC GAGGGAGATT CTGATTCGGA ACCCTCTTTT GACCAAGGCT CTTTTCCAGG CACAAATCAT GCTTGGAATG GTTCAGCCTC CGCAACTGAC TCCCAAAGTT GAACCACAAG CTATGCAACA GCCTCAACAA TCTCATCAAC CTATACCTCT AAAGCCAAAC GTTCAAGCTC ATATGTCTTC TATTCAAGGG GGAGGCAGTG TACATGAGCC AGCAAATACG ATGCAGCCAC AAGCCCCGAT TCGAAAACAC CCAACACCAC AACCAATGCC TATGCCTCCT CCGCCTTCTG TTTCTGCAAC CAATAATGCT CAATCACAAC CTCGTTTTTC GCATCCCCAG CGTCAGGGAC ATCTGAATCC TACTGTCACT TCTATGTCTC ATCAACAGTC TTCTCAAGTT CAAAACGCGC CTCCTCCGGC TCCCCATCAT CCAACATCCC AGCCACCTCC TTTTCATCAT CTTGATATAC CAGCTTCCTC CACTCAGTTG CAGCAACAAC CAATGCACTC GGGTGGAGGT CCTCATTTGG CACAGCAACA GCCTAGACCA TATCATCATC AATATGGACA AGCCCAAACT GGTCCAAACA CTGGGTTTCA GCACCATGGC ACACCTCCTC AGCATCTTTC TCAACCCATG TTTCATTCAG GCAACAGACC CCCTGCTGCT GGTGTACCTC AATTCCCGCA GGGACAGCAA CATCTGCCTA GTCAGCCAAC ATATCAGGGA GGAGGTCAAT ATCGTGGAGA CTACAACAAT AACCAATTAG CAGGTCTGAT GGCTCAAGAC AGAGGTCCTT CTTGGATGGC TGGCCAATCA GAGAGCTCAA ACATTACTCA TCTCCCAGGT TTAGGACCGG TGCCTCCACC AAGCCAAGTT GGGCCTGGAG GTGGCCCACC ACCTCGCCCT GCACCGATAT CTGCAGAGAT GGAGAAGGCA TTACTTCAAC AGGTGATGAG CCTAACGCCA GAGCAGATCA ATCTGCTGCC ACCAGAACAG AGAAACCAAG TCCTTCAGCT TCAACAGATT CTCCGACAGT GAAGCTCATT GATATGATCG CTTGGTCTCC ATGTTAGAAC ATTAGAAGAA ACAGGTTTTG GCTTTGAATG TAATCGGAGT TAAGTTTGGG ATAATTTGTA AAAAGAAAAA AAAAAGTAAT TAGATGTTTT CCAAAGTTCA AGGTGTCACT TAATACTTTT GGTCATATCC CCTGGAGAAA ATTCATGTGT TCTCTTTGAT TTAATGTTCG GTAACAATTT TTTTCCTGCC TTTCAAAGTT CCGATGTCTT GTTTAC |
| Length | 1456 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 15085290.. 15087950 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G73840.1 |
| Description | hydroxyproline-rich glycoprotein family protein |
| TAIR curator summary | Resembles the CstF64 family of RNA processing factors that are conserved between yeast and mammals. In mammals, CstF64 is a component of the CstF complex which is required for mRNA 3'end formation along with other factors. |
| Alias | [ESP1][ENHANCED SILENCING PHENOTYPE 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg495650 | |
| 10.7238 |
Ahg495202 | splicing factor-related |
| 11.3578 |
Ahg473949 | evolutionarily conserved C-terminal region 7 |
| 15 |
Ahg920487 | S15/NS1, RNA-binding protein |
| 18.3303 |
Ahg472969 | U2 snRNP auxiliary factor small subunit, putative |
| 18.9209 |
Ahg945361 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 19.8242 |
Ahg470771 | Transcription factor IIA, alpha/beta subunit |
| 20.7846 |
Ahg480888 | 26S proteasome regulatory subunit S2 1A |
| 22.8473 |
Ahg311691 | glyoxalase 2-4 |
| 24.0832 |
Ahg943669 | DHHC-type zinc finger family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|