| Annotation |
|---|
| Description | jgi|Araly1|474000|fgenesh2_kg.1__3954__AT1G48620.1 |
| Sequence |
AAAAAAAAAA ACCTAAAAAT CAAAAATCTC ATCACCTTCC TTGTTCTGTA ATATTTTCTC TCTCTAAATC CATGGATCCT TCTCTCTCTG TAACCAATGA TCCTCATCAT CCTCCTCAGT TCACATCTTT CCCTCCTTTC ACCACCAACT CCAACCCTTT CTCCACTCAA AACCACCCCT TCTTCACCGG AGCCACCGCC GTCGGGCCGC CAAACAACAT CCATCTCTAT CAAGCTCCTC CTCCGCAGCC ACAAACATCT CCAGTTCCTC CTCATCCATC TATTTCCCAC CCTCCTTACT CTGACATGAT TTGTACGGCG ATTGCAGCGT TAAACGAACC AGATGGGTCA AGCAAGCAAG CGATTTCGAG GTACATCGAA AGAATTTACA CTGGGATTCC TACTGCTCAT GGAGCTTTGT TGACACACCA TCTCAAGACT TTGAAGACCA GTGGGATTCT TATGATGGTT AAGAAATCTT ACAAGTTAGC TTCTACTCCT CCTCCTACTA GTGTAGCTGC AGCTTCTGGT CTTGAACCTC CCAGATCTGA TTTCATAGTC AACGAGAACC AACCTTTACC TGATCCGGGT TTGGCTTCTT CTACTACTCC TCAGACTCTG AAACGTGGTC GTGGTCGACC TCCAAAGACT AAACCAGATG TTGTTCAACC TCAACTCCAG ACTAATGGAA AACCCACCTG GGAACAGAGT GAATTACCTG TTTCTCGACC AGAGGAGATA CAGATACAGC CACAGCCACA GCCGACGGTT AAGAGACCGC CGGGTCGTCC TAGAAAAGAC GGAGCTTCAC CGACAGTGAA GGCAGCTGCT TCTGTTTCCG GCGGTGTGGA GACTGTGAAA CGAAGAGGTA GGCCTCCGAG TGGAAGAGCT GTTGGGAGAG AGAGGAAGCC TATTGTAGTC TCAGCTCCGG CTTCGGTGTT CCCGTATGTT GCTAATGGTG GTGTTAGACG CCGAGGGAGA CCAAAGAGAG TTGACGCTGG TGGTGCTTCC TCTGTTGCAC CACCACCACC ACCGCCACCT AACGCGGAGA GTGGAGGAGA GGAGGTTGCA GTCAAGAAAC GAGGAAGAGG ACGGCCTCCT AAGGTTGGAG GTGTTATCAG GAAGCCTATG AAGCCGATGA GAAGCTTTGC TCGTACTGGA AGACCCTTAG GAAGACCCAG AAAGAATGCG GTGTCAGTGG GAGCTTCTGG ACGACAAGAT GGTGATTATG GAGAACTTAA GAAGAAGTTT GAGTTGTTTC AAGCGAGAGC TAAGGATATT GTTATTGTGT TGAAATCTGA GATTGGAGGA AGTGGAAATC AAGCGGTGGT TCAAGCCATA CAGGACCTGG AAGGGCTAAC CGAGACAACA AACGAGCCAC AACAGCACAT GCCAGAATTG CAGCTGCCAG ACGAGGAACA CCCTGAAACC GAACCCGAAC CAGAGGGACA AGGACAGACA GAAGCAGAGG CAATGCAAGA AGCTCTGTTC TAAAGAGAGC CTTGACACAA AAAGCTAGCA AGTGGTGGGT TTGTTTGTTG TGTGTTCCAT GAAATTTTTA ATCTTTATAA GGGTGTTTGC AGGAGAAAAA CAAAAAGAAC AATGTGATGA TGATGATTGT GTTGTGTCTC TAACCAAACA ACAAGGAGAG GTAGGGTAAT GTCAGTAAAG TGAATTAGGA TGTTGCCATT GTTCATGCTT CCCATCTCTC TCTCCATCGT CCATATCTGT GTAGGCAGCT TTGTTCTTTG TTCCCTCGTG TTTTTTTTAG ACTCTGTTTC TCTTATTCTA TTTTGTCTCT TAGGATTTTT AGGAGTTTGT TTGGTGTTGA TGTTTATCAA AACGCTTATG TAATTTTTAT GACCACTTCA ACTTTTATGA TGGTTTCTTC TTCAGTCTCT TACGTGATGT AGT |
| Length | 1913 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 23628383.. 23631005 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G48620.1 |
| Description | high mobility group A5 |
| TAIR curator summary | This gene is predicted to encodes a histone H1/H5 family member. A plant line expressing an RNAi construct targeted against HON5 shows a reduced level of agrobacterium-mediated root transformation. |
| Alias | [HON5][high mobility group A5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.11043 |
Ahg491495 | TPX2 (targeting protein for Xklp2) protein family |
| 10.3923 |
Ahg479291 | winged-helix DNA-binding transcription factor family protein |
| 12.083 |
Ahg496864 | Subtilase family protein |
| 26.5518 |
Ahg334590 | Phosphoglycerate mutase family protein |
| 27.3861 |
Ahg935279 | IQ-domain 14 |
| 31.4643 |
Ahg491464 | LisH dimerisation motif;WD40/YVTN repeat-like-containing domain |
| 36 |
Ahg939389 | F-box/RNI-like superfamily protein |
| 42.0833 |
Ahg472902 | |
| 42.7083 |
Ahg494129 | Rad23 UV excision repair protein family |
| 50.1099 |
Ahg313117 | general regulatory factor 10 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|