Detail



ID : Ahg479291

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479291|fgenesh2_kg.3__1992__AT3G18035.1
Sequence
CAAAAATCAA AAGAGCTCAC AGAGCAAAAC CAAAAAAAAA AAAAGAAAAA AAACCCTAAA TCTAAATCTC ACCTTCCTCC TCTGTTTTTT TTTTTTTTTT TCATTTTTTT TACTGTTCTC TTTGCTCATC CATGGATCCA TCTCTTGGTG ATCCTCATCA TCCTCCTCAG TTCACCCCTT TCCCTTCTTT CCCCACCTCC AACCACTTCG TCTCCGGCGC CGTCCCTGCT CTAAATCATC ATCCCTTCAA CAACAACAAC CATGTCTTCC AACCGCAGCC GCAAACGCAA GTTCCCCAAC CGTCGATGAT TCAGGTCCCT CCACATCCCA TCAACCACCC TCCTTACTCC GAGATGATTT GCGCAGCGAT TGCGGCGTTA AACGAACCGG ATGGTTCGAG CAAGATGGCA ATTTCGAGAT ACATCGAGAG ATGTCATCCC GGTTTAACTT CTGCTCATGC TGCTTTGTTG ACTCATCATC TCAAGACTTT GAAGAACAGT GGTGTTCTTA CTATGGTTAA GAAATCTTAC AAAATTGCTG GCTCTTCTAC TCCTCCTGCG AGTGTTGCTG TTGCTGCTGC TGCTGCCGCT CAAGGTCTCG ATGTTCCCAG ATCTGTGATT CTCCCTTCAA CTAGCAGCAC CGTCAACGAT CCCATGGCTG TCTCTGCTTC TCAGCCTCTG AAACGAGGTC GTGGTCGTCC TCCTAAACCT AAACCCGAAG GTCAACAACA ACAACCCATC AATGCTCAGC CTATTCAAGT CCAGTCTAAC GGACAGCCAA TCTGGCAACA GCAGCAAGTC CAACTACCTG TGACTGTTCC GGTTCCTGTT ACGGAGTCGG CTAAGAGAGG ACCTGGTCGT CCAAGGAAGA ACGGAGCTGC TGCTGTTGCA CCAATCGTGC AAGCTTCGGT TATGGCTGGA ATCATGAAAC GTAGAGGTAG ACCACCAGGT CGTAGAGCTG CTGGGAGACA GAGGAAGCCT AAATCTGTTT CTGCTACTGC TTCTGTGTAT CCGTATGTTG CTAATGGTGC TAGACGCAGA GGAAGGCCTA GGAGAGTTGT TGACCCTAGC AGTATCGTTA CCGTTGCTCC AGTAGGTGGT GAAAATGTGG CAGCGGTTGC GCCGGGAATG AAGCGTGGAC GAGGACGACC ACCGAAGATT GGTGGTGTTA TCAGTAGGCT TATGAAGCCT AAGAGAGGAC GAGGACGTCC TGTAGGTAGA CCCAGAAAGT TTGCAACATC AGTCACGACT GGGGCACAAG ATTCTGGAGA ACTCAAGAAA AAGTTTGATA TTTTTCAAGA GAAAGTAAAA GAAATCGTGA AGGTGTTGAA AGATGGAGTT ACAAGCGAGA ATCAAGCAGT GGTGCAAGCC ATAAAAGATC TGGAAGCACT AACAGTGACG GAGACGGTTG TTGAGCCACA GGTGGAAGAA GTGCAGCCAG AGGAGACTGC TGAACCGCTC ACTGAAGCTG AAGCTGCTGA AACACAAGGA GGACAGGAAG AGGGACAAGA AAGAGAAGGA GGAGAAACAC AGACTCAGAC AGAAGCAGAG GCAATGCAAG AAGCTCTGTT CTGAAGAATA ATAATGATCT AGAAAACAAC CTAGACATAA TAGCCTTGGT GTTTGGCGTT AGGAGGAGTG TTTTTTTAGT TAATTTAGGT GTTGGATCGT ATCTTAAATT AAAAAAAAAA AAATCTATAT GGAATTTTAA TTTTTTTTGT AGGTTATGTT GTCTGCAAAA GAAGAAACAG TAGGCTCGTT AATGGTGTTG TTGTCGGTAT GTCTTTAACC AAACATTAAG ACGTGGCTGT AAATTAGCGA TGTTTCTAGT GTTCCATCTT TAATAATCTC TTATTGCGTC CGTGCCTTTG GTTTT 
Length1875
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7249677.. 7252279
Download Sequence
A.thaliana
AGI-codeAT3G18035.1
Descriptionwinged-helix DNA-binding transcription factor family protein
TAIR curator summaryA linker histone like protein
Alias[HON4]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg479266 glutamine synthetase 1.3
6 Ahg327957 Histone superfamily protein
6 Ahg472301 high mobility group B2
9.79796 Ahg490443
10.3923 Ahg474000 high mobility group A5
10.4881 Ahg471078 cell division cycle 5
16.4924 Ahg490588 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
19.975 Ahg328503 ENTH/ANTH/VHS superfamily protein
20.3961 Ahg490290 ETO1-like 1
20.445 Ahg933338 Histone superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression