Detail



ID : Ahg474891

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474891|fgenesh2_kg.2__21__AT1G64550.1
Sequence
TTATCAAATC AGTTTTTGTG GAATTTTGAA TCTCGTCGCT TCTGTGTTTG GCCATGACTG AAGTTGCGAG CTCGGTGGTG TATGAAGTGC TCGGACGCAG AGCTCAGGAT GTGGACGAGC CGATTATGGA CTACATCATC AATGTCCTCG CTGATGAAGA TTTCGACTTC GGTGAGGAAG GTGAAGGTGC CTTTGATGCC GTCGGTGAGC TCCTCGTCGC TGCTGAATGC GTTTCCGATT TCGAAGAGTG CCGTTTGGTT TGTAGCAAAC TGTCGGATAA GTTTGGAAAG CATGGATTGG TGAAGCCTAC ACCAACTGTG AGGAGTCTTG CTATGCCTGT GCGGATGAAC GATGGAATGG ATGATGGACC GGTGAAGAAG AAGAAGCCGG AGCCTGTGGA TGGCCCTTTG CTCACTGAAC GTGACTTGGC TAAGATTGAA AGGAGAAAGA AAAAGGATGA TCGCCAAAGA GAGCTACAAT ATCAACAGCA TGTTGCTGAA ATGGAAGCCG CTAAAGCAGG GATGCCTACT GTTAGTGTCA ATCATGACAC TGGTGGTGGC TCTGCCATCA GAGATATTCA TATGGATAAC TTTAATGTTT CTGTTGGTGG CCGTGACCTG ATTGTCGATG GATCAATCAC CCTCTCTTTT GGACGCCATT ACGGTCTTGT AGGACGTAAT GGTACCGGGA AAACAACTTT TTTGAGGTAT ATGGCTATGC ATGCTATAGA GGGTATTCCT ACTAATTGCC AGATATTGCA TGTCGAACAA GAAGTGGTTG GTGACAAGAC AACAGCCTTA CAATGCGTTC TTAACACTGA TATTGAAAGA ACCAAGCTGT TGGAAGAAGA AATTCAAATA CTGGCAAAGC AGAGAGAAAT GGAAGAACCC ACAGCTAAGG ATGGATTGCC TACCAAAGAC ACACTTGAAG GAGATCTTAT GTCTCAAAGG CTTGAAGAAA TATACAAAAG GCTTGATGCA ATTGATGCTT ATACTGCTGA GGCTCGGGCA GCTAGTATCC TTGCTGGTCT AAGTTTCACT CCAGAAATGC AGCTGAAAGC TACAAATACA TTTTCAGGAG GATGGAGGAT GCGAATTGCA CTTGCTCGTG CACTATTTAT AGAGCCTGAT TTGTTGTTGC TTGATGAACC TACGAACCAT CTTGATCTCC ATGCTGTCTT ATGGTTAGAA ACATATCTAA CGAAGTGGCC AAAAACATTT ATAGTCGTTT CCCATGCTAG GGAATTCTTG AACACGGTGG TCACGGACAT CATCCATTTG CAAAACCAAA AACTAAGTAC CTATAAGGGA AATTATGATA TTTTCGAAAG AACACGGGAA GAACAAGTGA AAAATCAACA AAAAGCTTTT GAATCAAGTG AACGATCACG GTCACATATG CAGGCGTTCA TTGATAAATT TCGTTACAAT GCAAAGAGGG CGTCTCTTGT TCAGTCAAGA ATCAAGGCAT TGGACCGACT GGCTCATGTG GATCAAGTTA TTAATGATCC CGACTATAAA TTTGAATTCC CAACTCCTGA CGATAAGCCT GGACCTCCCA TTATCAGTTT TAGTGATGCA TCATTTGGCT ACCCTGGTGG TCCGTTGTTG TTTAGGAACC TAAATTTCGG AATAGATCTG GACAGCCGTA TCGCAATGGT GGGACCGAAT GGTATTGGTA AATCAACAAT ACTCAAACTT ATTTCTGGGG ATCTGCAACC AAGCTCTGGA ACAGTTTTCC GTTCTGCCAA GGTTCGAGTT GCAGTTTTTA GTCAGCACCA TGTGGATGGA CTAGACCTTT CTTCGAATCC TCTTCTATAT ATGATGCGCT GCTACCCAGG AGTACCGGAA CAAAAGCTCA GAAGTCACTT GGGTTCTCTT GGTGTCACTG GAAATCTTGC ACTGCAGCCC ATGTACACTT TATCAGGTGG TCAGAAAAGC AGAGTTGCAT TTGCGAAGAT AACATTCAAG AAACCACACT TGCTATTGCT TGATGAGCCG TCCAATCATC TTGATCTGGA TGCTGTGGAA GCTTTGATTC AAGGACTTGT CTTATTCCAA GGCGGTATTT GCATGGTGAG TCACGACGAG CATCTGATAT CGGGAAGCGT GGACGAGTTG TGGGTTGTGT CAGATGGCAG GATTGCACCA TTCCATGGAA CCTTCCATGA CTACAAGAAA CTTCTCCAAT CTTCAACTTA AGCTGCGCTG CATTTATATT CCCCAAATCC ATGTTGCGTT TTGCGTTTTG TTTACCCTCG CAATACGACA CGAGTCCTTT ATTATACCTG AGATTTGGCG ACCGTATTTT GCTTTATGTC TTAAGGTTGA AACTAAAAAG AAATACTGTA AAAACATTAT ACTTGTTGGA ACACGAAAGT ATTCATATCC TCCAATGTGC ATCATTCGTA AAATTGTGAA CGTATTTTCG AGCCAAATTA AAAGAAAAGA 
Length2450
Protein Sequence
Protein Residue
Map Locationscaffold_2: 124119.. 129688
Download Sequence
A.thaliana
AGI-codeAT1G64550.1
Descriptiongeneral control non-repressible 3
TAIR curator summarymember of GCN subfamily
Alias[ABCF3][AtABCF3][AtGCN20][ATGCN3][GCN20][GCN3][SCORD5][ATP-binding cassette F3][general control non-repressible 3][general control non-repressible 20][susceptible to coronatine-deficient Pst DC3000 5]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg912305 disease resistance protein (TIR-NBS-LRR class), putative
6.9282 Ahg932206 riboflavin biosynthesis protein, putative
8.3666 Ahg477251 Pre-mRNA-processing-splicing factor
9 Ahg474974
10.583 Ahg493972 DegP protease 9
12.7279 Ahg478657 Trypsin family protein
14 Ahg327775 histone deacetylase 1
15.8745 Ahg479309 modifier of snc1,4
16.9115 Ahg945018 Transducin/WD40 repeat-like superfamily protein
20.199 Ahg486659 Plant protein 1589 of unknown function
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression