Detail



ID : Ahg493972

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493972|fgenesh2_kg.7__3405__AT5G40200.1
Sequence
AATTTCAAAT TCGCTGAGAA GTTACAATCC AGAGGAAAAG ATCATCTTTT TCCTTCTGGG TTGATGGAAA AGATGAAGAC TTCTCAAAAG AGAGGACGCA AACACAAAAG ACAAGATGCT TCATCGGCGG GAAACGCCGG CGGCGAAGTT GAAGAAGCTT CCGTTAACGA AGCATCGTTA TCTCAATCCC CTGAGCCTGT TTCAGCTTCT GAAGCAAACC CATCTCCGTC GCGACGCAGT CGTGGGAGAG GTAAAAAGCG TAGATTGAAC AATGAATCAG AAGCTAATAA CCAGAGGACT TCGTCACCAG AGCGTAGTAG ATCTCGTCTT CATCATTCTG ATTCGAAGAA TGGTGATTGT AGCAATGGGA TGATTGTTTC AGCAACTACT GAATCGATTC CTGCTGCTCC GAGTTGGGAA ACAGTGGTTA AAGTTGTTCC TTCAATGGAT GCTGTGGTTA AAGTCTTTTG TGTTCACACT GAACCTAATT TCTCGTTGCC ATGGCAAAGG AAAAGACAGT ATAGTTCTGG TAGTAGTGGT TTTATTATTG GAGGAAGAAG AGTTTTGACT AATGCACATT CTGTTGAGCA TCATACTCAA GTTAAACTCA AGAAGCGTGG CTCTGATACT AAGTATTTGG CGACAGTCTT GGCCATTGGA ACTGAATGTG ACATTGCTTT GTTGACTGTT ACGGATGATG AGTTTTGGGA AGGAGTATCT CCTGTGGAGT TTGGCGATTT ACCAGCTTTG CAAGATGCTG TTACTGTTGT TGGTTATCCA ATTGGTGGTG ATACAATCTC TGTCACAAGC GGTGTTGTTT CGCGGATGGA GATATTGTCG TATGTGCATG GATCAACCGA GCTTTTGGGA TTACAGATTG ATGCAGCTAT TAATTCTGGG AATTCTGGTG GTCCTGCATT TAACGACAAA GGAAAGTGTG TTGGCATTGC GTTTCAGTCG TTGAAACACG AAGATGCTGA GAATATTGGT TATGTCATTC CCACACCAGT GATTGTACAT TTCATTCAAG ATTATGAGAA GCATGATAAA TACACAGGTT TTCCTGTTCT TGGAATTGAG TGGCAAAAGA TGGAAAATCC TGATTTGCGT AAGTCAATGG GTATGGAATC TCATCAAAAG GGAGTGCGGA TAAGAAGAAT CGAGCCAACC GCCCCAGAAT CACAAGTTTT GAAGCCTTCC GATATTATCC TTAGTTTTGA CGGAGTTAAT ATCGCTAATG ATGGAACTGT TCCGTTTAGG CATGGAGAAA GAATTGGCTT TAGCTATCTT ATATCTCAAA AGTACACTGG AGATTCTGCT CTTGTGAAGG TTCTACGTAA AAAAGAAATA TTAGAATTCA ACATAAAACT TGCAATCCAC AAGAGGCTAA TCCCTGCACA CATAAGTGGC AAACCTCCTT CGTACTTCAT TGTTGCTGGC TTTGTTTTTA CAACTGTCTC TGTTCCATAT CTTCGATCTG AGTATGGAAA AGAATATGAA TTTGACGCGC CTGTCAAGCT ATTGGAAAAA CATCTTCATG CAATGGCTCA ATCCGTGGAC GAGCAGCTTG TTGTAGTTTC ACAGGTTCTT GTTTCTGACA TTAACATTGG ATACGAGGAG ATTGTCAACA CCCAGGTTCT CGCTTTCAAT GGCAAACCTG TGAAAAACTT GAAAGGTTTA GCTGAGATGG TGGAGAAGTG TGAGGATGAA TATATGACGT TTAATCTAGA TTATGATCAG ATTGTTACTC TGGAAACTAA GACAGCAAAG GAAGCAACTT TAGATATTCT GACCACCCAT TGCATACCTT CTGCTATGTC TGATGATCTC AAGACTGAAG AAAGAAAGTG AAACAGGAGG CACAACCATA CACCGAAGGA GAGAAAGAGA GAGTTTGGTC CATTGGAAGG ACAGAAGCAA ATACAGTCAT TGAAAAGACA AAGAGAAGCT CACACCATAA TTTAATTTTT CTTGATTTCT GTTTGTTTTT GTATTTGGAA AAATATGCAG GAAGATATAC GTTGGTTATT TTTT 
Length2034
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21159489.. 21162451
Download Sequence
A.thaliana
AGI-codeAT5G40200.1
DescriptionDegP protease 9
TAIR curator summaryEncodes a putative DegP protease.
Alias[DEG9][DegP9][degradation of periplasmic proteins 9][DegP protease 9]
Gene coexpression
MR
MR Locus Description
10.583 Ahg474891 general control non-repressible 3
11.6619 Ahg480841 Transducin/WD40 repeat-like superfamily protein
11.7473 Ahg474047 stomatal cytokinesis defective / SCD1 protein (SCD1)
15.2971 Ahg911763 nucleoporin 155
17.4356 Ahg908764 carboxypeptidase D, putative
18 Ahg944613 myosin, putative
18.3303 Ahg486216 nuclear RNA polymerase A1
18.6548 Ahg471749 Tetratricopeptide repeat (TPR)-like superfamily protein
22.5832 Ahg484013 Lung seven transmembrane receptor family protein
23.9165 Ahg352054 Uncharacterised conserved protein UCP009193
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression