Detail



ID : Ahg475237

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475237|fgenesh2_kg.2__367__AT1G60940.1
Sequence
AAGAGCCATC GTGACTTCGT GAGAAGAAGC CAGCAAGGAA CGATGGAGAT TATTACGGCA TCATCATCAT CATTGTAATC TTCTTCTCTT AGAATTTCTT CACGGATAAG AAAAAAGGAT ATCGACAATT TCGCTTTTGC TTTCAAAAAT TCCATTTTCA CTTTGTTCCC TTTTTTAACA ATCGCGAAAA ACCTCTAAAT CGCTTCCCTT CAATTTCTGG GTTTTCAATT TTCACTTGGA GATTTTGGGG GAATTGTTTG TGTTGTTTAC AAGAAAATGG ACAAGTACGA GCTTGTTAAA GACATCGGTG CTGGGAATTT TGGAGTGGCT AGGCTCATGA GAGTCAAAAA CTCCAAAGAA CTCGTTGCTA TGAAGTACAT CGAGCGTGGC CCAAAGATTG ATGAGAACGT GGCGAGAGAG ATTATTAATC ATAGATCACT TCGTCATCCC AATATAATCC GGTTTAAGGA GGTGGTTTTG ACACCAACAC ACATCGCCAT TGCTATGGAA TTTGCTGCTG GCGGTGAGTT ATTTGAGCGT ATATGTAGTG CTGGAAGATT CAGTGAGGAT GAGGCAAGAT ACTTTTTCCA GCAGCTTATA TCTGGAGTCA GCTATTGCCA TGCTATGCAA ATATGCCATA GAGATCTGAA GCTCGAAAAT ACCCTCTTGG ATGGAAGTCC TGCTCCACGC CTGAAAATCT GTGATTTTGG TTATTCCAAG TCCTCACTGT TGCACTCTAT GCCCAAATCA ACTGTTGGAA CTCCAGCATA TATTGCACCT GAGGTTCTTT CTCGCGGAGA GTATGATGGC AAGATGGCTG ATGTATGGTC TTGTGGTGTG ACTCTTTATG TCATGCTGGT GGGAGCATAC CCATTTGAAG ACCAAGAGGA TCCTAAAAAC TTCAAAAAAA CAATACAAAG AATAATGGCT GTCAAGTACA AGATCCCGGA CTATGTCCAT ATCTCACAAG ATTGCAAACA TCTCCTCTCC CGTATATTTG TCGCCAACTC GAATAAGAGG ATTAAGATAG CTGAGATCAA GAAACATCCA TGGTTCCTAA AGAACCTGCC AAGGGAACTT ACAGAAACAG CTCAAGCTGT ATACTTCAGT AAAGAGAACC CGACATTCTC GCTCCAAAGT GTCGAAGAGA TCATGAAGAT TGTGGAAGAG GCAAAAACTC CAGCTCCTGT TTCTCGATCG ATTGGAGCAT TTGGGTGGGG AGGAGAAGAA GATGCCGAGG GCATGGAGGA AGAGGTTGAG GAAGTAGAAG AAGATGAGTA TGATAAGACA GTGAAGCAAG TGCATGCTAG CATGGGAGAA GTCCGAGTCA GTTAAAACAC AATATAAGAT TGGTTTTGTT TTCAAGAAAG TTTTCTAAAA CCAAAAAAAA AGAAAGAAAA GGTTTTCGTT GGTCTGTCGA ATTTGTCTCT TGCTCTCTGT TGAGTTTTAA GGTTCGTCTC ATAAATGCTT TGGGATTTTT CTTTTGAAAA TCTTGTAAAA TTTGTAGTAG AAGAAAGAAC AGACTGGTTG ATGATAAGGT CGTTTTGGGC ATCATAAAAT ATTTTGTATA TTTTATGGTC TTTTT 
Length1585
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2637315.. 2640108
Download Sequence
A.thaliana
AGI-codeAT1G60940.1
DescriptionSNF1-related protein kinase 2.10
TAIR curator summaryencodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.
Alias[SNRK2-10][SNRK2.10][SRK2B][SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-10][SNF1-related protein kinase 2.10][SNF1-RELATED KINASE 2B]
Gene coexpression
MR
MR Locus Description
6.85565 Ahg472044 ketose-bisphosphate aldolase class-II family protein
14.2478 Ahg482483 Histone H3 K4-specific methyltransferase SET7/9 family protein
16.3095 Ahg935788 sister-chromatid cohesion protein 3
17.6635 Ahg487989 aspartate aminotransferase 3
21.0713 Ahg921319 T-complex protein 11
24.98 Ahg904559 Isochorismatase family protein
25.6905 Ahg473917 heavy metal atpase 4
29.5973 Ahg470277 peroxin 6
32.0156 Ahg481517 Plant protein of unknown function (DUF827)
34.9857 Ahg472149 DA1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression