| Annotation |
|---|
| Description | jgi|Araly1|470277|fgenesh2_kg.1__231__AT1G03000.1 |
| Sequence |
GAATTCGATT TGATTCCGTT GCAATGGTGG AGAGACGGAA TCCTTTGGTT CTATCATCCA CCAGAAGCAC ACTCCGTTCA GTGCTCGGTT CGTTACAACC CAGCTCTGCC GATGGTGACC GAGTTCTGAA TCACGACGGG ATTGTTTTGG GCGGATCCGA CTTGTCACGA GGGAACGTTA ATTTGTCTGC GGGAATTCTC CGGTGGCGGA GGGACGGAGA AAATGTTTCC GATGCAAAAT TGGATTCTTT AGATGACTCT GCATTGGTTG GGCTCTCCAC TCAATTGCTT AAGAGACTAT CTATCAATTC TGGTTCTTTG GTTGTTATCA AGAACATTGA GATAGGCATT CAACGGGTTG CGCAAGTTGT TGTACTTGAT CCTCCCAAGA CGACGCTGGA AGATGCATCT GTCACTCAAG TGCCTGTTTC GGACTCTCTT CATACGATGC TTGTCTTTCC CACTTATGAT TTGATGGCCC AGCACTTGTT AGATCAAGAG GTTGCTTACT TGTCCCCAAT GTTAGCTTTT AATCTTAGCT TGCATATATC TTGCCTGAAA TCCCTCGTCC ACCGAGGGAA CGGGGTCTTA GAGAAGTATT TTGAAGCTAA GTTTGACGAG GAGTTTATCG GAAAATCTGC GGCAGATGGG TTGAAGATTG GTTTGGATTT GGAACCTGTG TCTGATGTCC CAGGCTATGC ATCACATCTG AGAGTTTCTT TTGTTAAAAT CCCAGAGTGT GGTACCATTC AATCCCTGAA ACTCAATTCG TCATTTGAAG CTGAAGAGCG ACAAGGGTTA ATAGATTCTG CATTACATAA GTATTTTGGA ACTGATAGAC AGCTGTCAAG AGGCGATATA TTTCGCATTT ACATTGACTG GAATTGTGGT TCAAGCATTT GTATTCCATG TAGTCAAAGG TTGTGCTCCG AAAGCGACGA CTATATATAT TTTAAGGTTA TCGCGATGGA ACCTTCTAAT GAGAGGTATC TTCGAGTCAA TCACTCCCAA ACCGCCCTTG TCCTTGGAGG AACTGTATCT TCTGGTCTTC CACCAGATTT GCTGGTGTAT AGATCAAAGG TTCCTATGCC CTTGCAGGAG GAGACAGTAA ATATTTTGGC ATCAGTGCTT TCACCACCTC TCTGCCCATC AGCACTCGCC TCAAAACTCA GGGTTGCTGT TTTACTGCAT GGTCTGCCAG GGTGCGGGAA GAGAACTGTT GTTAACTATG TTGCTAGGAG GTTGGGGCTG CATGTAGTTG AATATAGCTG CCACAGTTTA TTAGCATCAT CTGAGAGGAA AACATCTACT GCTTTGGCCC AGACTTTTAA TATGGCACGA AGGTATTCAC CAACGATACT TCTGCTTCGC CATTTCGATG TTTTTAAAAA TCTGGGCTCT CAGGATGGTT CACTGGGTGA TCGAGTTGGT GTGTCCTCTG AGATTGCATC CGTGATTAGG GAACTCACTG ATCCAGTTTC TAATGGTGAA AACAGTTCCA TGGAAGAAAA ATCGAATAGC AATTTCTCTG AAGATGAAGT TGGGAAGTTT AGGGGACATC AAGTGCTATT AATCGCATCT GCTGAAAGTA CTGAGGGTAT CTCTCCAACA ATTAGGCGTT GCTTTAGTCA TGAAATACGT ATGGGTTCTT TGAATGACGA ACAGAGATCT GAAATGCTGA CTCAGTCCCT CCAAGGCGTC TCTCAATTCC TTAATACCAG CTCAGATGAC TTTATGAAAG GATTGGTGGG ACAGACTTCT GGCTTCCTTC CTCGGGACTT GCGTGCTCTT GTAGCTGATG CTGGTGCCAA CTTATATATC AGTCAAGAGT CCGAGACCAA GAAAGTTAAC TCTCTGTCAG ATGATCTTCA TGGAGTTGAT GTACACCAGG CAAGCCAATT AGGTATCAGT AGTGATGCAT TAACAGCTAA GGAAGACTTT ACCAAAGCTT TAGATCGATC AAAGAAGAGA AATGCATCAG CCCTTGGTGC TCCTAAGGTT CCAAATGTGA AATGGGATGA TGTTGGTGGG CTTGAGGATG TGAAGACATC GATATTGGAC ACAGTTCAAT TACCTCTCCT GCATAAAGAT TTATTTTCGT CCGGATTGCG TAAACGTTCT GGTGTACTTC TCTATGGCCC TCCAGGAACA GGGAAAACTT TACTGGCAAA AGCTGTGGCG ACAGAGTGCT CCTTAAATTT CCTCAGTGTA AAGGGTCCAG AATTAATAAA CATGTATATT GGAGAGTCAG AGAAAAATGT TCGAGATATA TTTGAAAAGG CAAGGTCAGC GCGACCTTGT GTGATCTTCT TTGATGAGCT TGATTCTCTT GCTCCAGCTC GAGGTGCTTC TGGTGATTCT GGAGGAGTCA TGGATCGAGT GGTCTCTCAG ATGCTTGCAG AGATTGATGG ACTCAGCGAC TCTTCCCAGG ATCTGTTTAT TATAGGAGCA AGCAACAGAC CTGACTTGAT TGATCCAGCT CTTTTACGGC CTGGCAGATT CGACAAACTT CTGTATGTTG GAGTCAACGC TGATGCGTCT TACAGGGAAA GGGTCCTCAA AGCACTAACT CGGAAATTCA AGTTAAGCGA AGATGTATCT CTTTATTCAG TAGCAAAGAA GTGTCCCTCT ACATTCACCG GCGCTGATAT GTACGCATTG TGTGCTGATG CTTGGTTTCA GGCAGCTAAG CGAAAGGTCT CAAAATCAGA TTCAGGGGAT TTTCCTCCAG AAGATGATCC GGATTCAGTC GTTGTAGAGT ATGTGGATTT TATAAAGGCA ATGGATCAGC TCTCGCCATC ACTCTCCATA ACTGAGCTTA AGAAGTATGA GATGCTTCGA GATCAATTTC AAGGCCGTTC CAGCTAAACC CTTCCTAAAC AAGAAATTAG CATATATAAT GGAGACATTT CATATTTTTT TGATTTGGTT AGTCAATCCA TTGTAAAATT AA |
| Length | 2952 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 787329.. 791455 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G03000.1 |
| Description | peroxin 6 |
| TAIR curator summary | Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import. |
| Alias | [PEX6][peroxin 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg495780 | CwfJ-like family protein / zinc finger (CCCH-type) family protein |
| 6.78233 |
Ahg475318 | pyruvate dehydrogenase complex E1 alpha subunit |
| 8.48528 |
Ahg921000 | Pseudouridine synthase family protein |
| 14.4568 |
Ahg941740 | vesicle-associated membrane protein 714 |
| 15.5563 |
Ahg923251 | NagB/RpiA/CoA transferase-like superfamily protein |
| 16.4317 |
Ahg480465 | protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases |
| 16.7033 |
Ahg491167 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 18.2209 |
Ahg482666 | glucan synthase-like 8 |
| 21.6333 |
Ahg351112 | RNA polymerase II transcription mediators |
| 22.2486 |
Ahg474701 | TBP-ASSOCIATED FACTOR 6B |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|