Detail



ID : Ahg475543

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475543|fgenesh2_kg.2__673__AT1G41830.1
Sequence
TCTCTCCCTC AACGCACTTA AATTTACATA ACTAAGTGTG TGTCTATTCA TATCACTCAC TCTCTCTCTC TTCCTCACTC TCACATTCTC CCTCTCTTTA TTTTTTCTCT CTCACCACAA GAAACGCCGT AGTTCATTAA AAATGATGAC GGTGGGCAGA TCCGGAGGCA CCGTCGTCCT ATTGTTCTGC CTATCATTCT TCGCGGCGGT AACCGCCGAG AGTCCATACC GATTCTTTGA CTGGAATGTA ACATACGGCG ACATTTACCC ACTCGGTGTT CGTCAGCAGG GAATATTGAT TAATGGGAAA TTTCCGGGAC CGGACATTCA CAGTGTGACA AACGACAATC TCATCATTAA CGTACACAAC AGCTTAGACG AGCCTTTCTT AATCTCATGG AACGGAGTAC AAAACAGAAG AAATTCTTAT GTCGATGGAA TGTACGGAAC CACGTGTCCA ATTCCACCGA GAAGCAACTA CACATACATT TTGCAAGTGA AAGATCAAAT TGGAAGTTTC TATTACTTCC CATCTCTTGC TTTTCACAAG GCAGCTGGTG GATTCGGAGG TATCAGAATC CTTAGTCGTC CTGGAATTCC AGTTCCATTC GCTGACCCTG CAGGAGATTA TACTGTCCTC ATTGGAAATT GGTACAAATC TAATCACACG GATTTGAAGT CTCGTCTTGA CAGAGGAAGG AAGTTACCTT TGCCTGATGG TATTCTTATC AATGGCCGAA GCAACGGTGC TACCTTAAAC GTTGAACAAG GAAAAACATA CCGATTGAGG ATATCAAACG TTGGATTACA AGATTCTCTA AATTTCAGAA TCCAAAACCA CAGAATGAAG CTTGTGGAAG TCGAAGGGAC GCACACACTT CAAACCATGT TTTCCTCACT GGACGTTCAC GTTGGCCAGT CTTACTCCGT TCTGATTACT GCTGACCAAT ATCCTCGTGA CTACTACGTG GTTGTCTCGT CTCGGTTCAC TAATAAAATC ATAACAGCCA CTGGCGTTCT TCGCTACAGT GGCTCGTCCA CCCCAGCTTC TGGTCCTATT CCTGGTGGTC CCACAATTCA GGTTGATTGG TCCTTGAACC AAGCACGTGC CATCAGAACC AATTTGACGG CTAGTGGACC AAGACCTAAC CCGCAAGGCT CATACCATTA TGGTCTTATA CCGCTCATTA GGACTATTGT TTTCGGTAGT TCAGCCGGAC AGATAAATGG GAAACAAAGA TATGGTGTCA ATAGTGTGTC ATTTGTGCCA GCTGATACCC CTCTAAAACT GGCTGACTTC TTCAAGATTA GTGGTGTCTA TAAGATCAAC AGCATCTCGG ACAAACCCAC ATATGGAGGT TTATACCTTG ACACATCCGT TTTGCAAGTC GACTATCGAA CCTTTATCGA GATTGTATTC GAGAACCAAG AAGATATCGT CCAAAGTTAT CATCTCAATG GTTACTCCTT TTGGGTTGTC GGGATGGATG GTGGACAGTG GAAGACAGGA AGCAGAAATG GTTATAATTT ACGCGATGCA GTTTCACGTT CCACCGTCCA AGTGTACCCA AAATCCTGGA CAGCCATTTA CATTGCATTA GACAACGTAG GAATGTGGAA CTTAAGATCA GAGTTTTGGG CAAGACAGTA CTTGGGACAA CAACTTTATT TACGTGTCTT CACGTCATCA ACGTCTTTGA GAGATGAGTA CCCTATCCCG AAGAATTCGC GTTTGTGCGG CCGGGCAAAA GGACGACATA CTAGGCCTTT GTAAGGAAGA TATACGATTA CGTGAAAGTC ATCATATCCA TACACGTTTA TGTTATTTCT TGCGAAGACT TGCAAGGTTA CAA 
Length1853
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8150539.. 8155351
Download Sequence
A.thaliana
AGI-codeAT1G41830.1
DescriptionSKU5-similar 6
TAIR curator summary
Alias[SKS6][SKS6][SKU5 SIMILAR 6][SKU5-similar 6]
Gene coexpression
MR
MR Locus Description
13.6748 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
15.4919 Ahg926353 polygalacturonase 2
16.6132 Ahg485285 IQ-domain 21
18.1934 Ahg942084
22.1811 Ahg481566 pleiotropic drug resistance 4
24.0832 Ahg483921 Tetratricopeptide repeat (TPR)-like superfamily protein
24.2487 Ahg480375 arabinogalactan protein 9
29.4958 Ahg493180 arabinogalactan-protein family
30.7409 Ahg473169 GDSL-like Lipase/Acylhydrolase superfamily protein
32.7109 Ahg943148 Cupredoxin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression