| Annotation |
|---|
| Description | jgi|Araly1|475672|fgenesh2_kg.2__802__AT4G37120.1 |
| Sequence |
GTCGAAGCTT CACGATCGTA TAATCATGGC GACGGCTTCA GTTGCTTTTA AGTCTAGGGA AGATCATAGG AAGCAAATCG AATTAGAGGA AGCTCGTAAA GCCGGGCTTG CTCCAGCTGA GGTTGATGAG GATGGAAAGG AAATCAATCC TCATATCCCG CAGTATATGT CATCTGCTCC ATGGTATCTT AATTCTGAAA AACCGAGTTT GAAGCATCAA AGGAAATGGA AGAGTGATCC TAATTACACT AAGTCATGGT ATGACAGAGG TGCAAAGATC TTTCAAGCTG AAAAATACCG AAAGGGAGCG TGTCAAAACT GTGGTGCAAT GACGCATACT GCTAAAGCTT GTATGGATAG GCCTCGTAAG GTTGGGGCAA AGTACACAAA CAAGAACATT GCACCTGATG AGAAAATTGA GAGTTTTGAG CTTGACTACG ATGGCAAGAG AGACCGATGG AATGGTTATG ATCCTTCAAC CTACCATCGT GTGATAGATC TTTATGAAGC AAAAGAGGAT GCTCGAAAGA AGTACTTGAA GGAGCAGCAA CTTAAGAAAC TGGAGGAAAA GAACAATAAC GAAAAAGGTG ATGAGGCAAC CAGTGATGGG GAGGAAGAAG AAGATGACTT AAGGGTTGAT GAAGCCAAGG TTGATGAGAG CAGGCAGATG GATTTTGCAA AGGTTGAAAA GCGTGTTCGA ACAACTGGTG GTGGTAGCAC AGGAACTGTT AGGAATCTGC GTATCAGAGA AGACACTGCA AAATACCTGT TGAACCTCGA TGTCAACTCA GCTCATTATG ACCCTAAAAC TCGTTCTATG CGTGAAGACC CGCTTCCAGA TGCAGATCCA AATGACAAGT TTTATCTGGG AGATAATCAA TATAGAAACA GTGGCCAAGC TTTGGAGTTC AAACAGCTAA ACATCCATTC GTGGGAAGCA TTTGACAAGG GACAGGACAT GCATATGCAA GCGGCTCCCT CTCAAGCTGA ATTGCTCTAT AAGAGCTTTC AGGTTGCGAA GGAGAAACTG AAATCTCAGA CAAAGGACAC AATCATGGAC AAGTACGGGA ATGCAGCTAC AGAAGATGAA ATTCCAATGG AGCTTTTGCT TGGGCAAAGC GAAAGACAAG TTGAGTATGA TCGAGCAGGG AGGATTATAA AGGGACAGGA GGTGATATTG CCAAAGAGTA AATATGAAGA AGATGTTCAT GCTAACAATC ACACTAGTGT GTGGGGCTCA TATTGGAAAG ATCATCAATG GGGATATAAA TGTTGCCAGC AGATCATTCG CAATAGTTAC TGCACAGGTT CTGCTGGAAT TGAAGCTGCA GAGGCTGCCC TTGATCTGAT GAAGGCTAAT ATTGCTCGCA AAGAAGCATC TGAAGAGAGC CCAAAGAAGG TTGAAGAGAA GAGAATGGCC TCATGGGGAA CTGATATTCC TGAAGATTTG GAATTGAACG AGGAGGCTCT TGCTAATGCT CTTAAAAAGG AGGATCTCAG TAGGAAGGAA GAAAAAGATG AGAGGAAACG TAAATACAAT GTCAAATACA ACAACGATGT GACTCCGGAA GAGATGGAAG CTTACAGAAT GAAGAGAGTT CACCATGAGG ATCCAATGAG AGATTTCCTC GGCTGA |
| Length | 1636 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 9288660.. 9291665 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G65660.1 |
| Description | Pre-mRNA splicing Prp18-interacting factor |
| TAIR curator summary | Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells. |
| Alias | [SMP1][SWELLMAP 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg471661 | Protein of unknown function (DUF1423) |
| 8 |
Ahg496130 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 12.4097 |
Ahg947365 | PRP38 family protein |
| 17.1756 |
Ahg350108 | |
| 23.1517 |
Ahg938862 | multiprotein bridging factor 1B |
| 23.9165 |
Ahg936283 | Protein of unknown function (DUF1644) |
| 26.096 |
Ahg494346 | disease resistance protein (TIR-NBS-LRR class) family |
| 26.8328 |
Ahg472032 | Protein kinase superfamily protein |
| 27.3496 |
Ahg486060 | alpha-soluble NSF attachment protein 2 |
| 28.7054 |
Ahg472338 | squamosa promoter binding protein-like 14 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|