| Annotation |
|---|
| Description | jgi|Araly1|947365|scaffold_703594.1 |
| Sequence |
TATCTCTCTC AGTATAAAAC ATGGCGGAGA TACAGACGAA TGGGAGGGCG TATGAGTCAT TATTGGAAAA GGTTCTTTCA ATGAACATTC TTTCTTCTGA CTATTTCAAA GAGCTCTATG GTTTAAAGAC TTATCATGAG GTTATTGATG AAATCTACAA CCAAGTTAAT CATGTGGAGC CGTGGATGGG TGGAAACTGC CGCGGTCCTT CAACAGCGTA TTGTCTTCTC TACAAATTCT TTACCATGAA ACTTACCGTG AAGCAGATGC ATGGGTTGTT GAAGCACACA GATTCTCCTT ATATTAGAGC GGTTGGATTC CTATATTTAA GATATGTTGC AGATGCAAAG ACGTTGTGGA CATGGTATGA GCCATACATT AAAGATGATG AGGAGTTTTC ACCTGGATCA AATGGACGGA TGACGACAAT GGGTGTTTAT GTACGTGATT TGCTGCTTGG ACTGTACTAC TTTGATACTC TGTTTCCTCG TATACCTGTT CCCGTGATGC GCCAGATTGT ATCAAACCTT GAGAAGATGA ATTTACCAAC TAAACCTTCT GGATCAACCG GAGACATGAC CCGTGGCTCA GAAGACACTG CCCGTCGTCC ACCATCAGTA AAAGCATCCC TCTCTGTATC ATTTGGTCAG CGTGCACCTC ATCGTGCTTC CACCAGAGGC TCCTCTCCGG TTCGCCGTCC TCCACTGTCT GGTTATGACA GAAATGGAGG CGATGAAGTA AAACAGCGGT CCCCACGTAG AAGCCAGAGC CGAGACTATT ATTCTGATAG AGACTCAGAT AGACAGCGGG AGAGAGAGAG GGAGAAAGAC CGCGAAAGGG ACAGAGACAG AGACAGGGAG AGGGAGAGAG ATAGATACAG AGAAAGGGAA AGGGATTATG GTAATGATAG GAGATCAAGG CGTGACTATG ATAGTAGAAG CAAACGCAAT GATTATGAGG ATGATAGAAG CAGACATAAC CGGAGAAGCA GGAGCAGAAG CAGAAGTAGG AGCAGGAGTG TGCAGATTGA GCGTGAACCA ACTCCTAGCA ACAAGGAGAA ATCTGCTGTG ACTGTGAACA GCAATCTCGC AAAGCTAAAA GATTTGTATG GAGACGCGAG TAGTCAGAAA AGGGATGAAG GATTTGGAAC AAGGAGAGAT TCAAGTTCAG AAGAAGTGAT AAAGCTTGGT GGCTCTTCTT GGAGGTGAAA AAACAAAAAC TGTGGATT |
| Length | 1228 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 18987418.. 18990534 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G37370.1 |
| Description | PRP38 family protein |
| TAIR curator summary | encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt. |
| Alias | [ATSRL1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg352843 | Protein of unknown function (DUF300) |
| 4.24264 |
Ahg486690 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 4.24264 |
Ahg479552 | EPS15 homology domain 1 |
| 7.93725 |
Ahg475449 | DNA-binding bromodomain-containing protein |
| 10.247 |
Ahg355148 | calmodulin binding;transcription regulators |
| 12.4097 |
Ahg475672 | Pre-mRNA splicing Prp18-interacting factor |
| 13.784 |
Ahg483774 | BTB/POZ/Kelch-associated protein |
| 14.2478 |
Ahg472790 | Phosphatidylinositol 3- and 4-kinase family protein |
| 14.6969 |
Ahg482233 | DCD (Development and Cell Death) domain protein |
| 15.906 |
Ahg484067 | phytanoyl-CoA dioxygenase (PhyH) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|