Detail



ID : Ahg475885

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475885|fgenesh2_kg.2__1015__AT1G67800.2
Sequence
ATCAAAGAAG GGAACTTTGT TGTTGGGTTG ATCTGAATTT TTGATTTATG CTTCAAGTGT TGCAGGCGAT TGTTTTGTTT ATCTTGTTTT GGGTTTGGTT GTCTTGGATG GGAGGAAGTA GCTCAAAAGA GTCGAATAGA GGTGAAAGTA GTCGAAGGTA TGAACGTAGT GTGTCTGGTA GCTCTTCTTA TTCGTCTGCT TGGGACCAGA ACAGCTATTA TCAGACACCA AACCATCCAT CTGCGTCTCC TGTTTCCTCC TACAATTCTG GGAGACAAAC TCCGAAGAAT CTTGAGAGGA AGTATTCACG GATTGCTGAT AACTACCGTT CCATCGATGA GGTTACCGCT GCTCTTTCAC ATGCCGGTTT GGAGTCCTCG AATCTCATTG TTGGTATAGA TGTCACAAAG AGCAATGAGT GGACAGGGGC AAGATCATTT GGTAGGAAGA GTCTGCATTA CATTGGAACA ACTCCAAACC CTTACCAGCA AGCTATTTCC ATCATTGGAA AGACTTTGTC AGTTTTTGAT GAGGATAATT TGATCCCCTG TTATGGATTC GGAGATGCTA CAACCCATGA TCAGGATGTC TTCAGTTTCA ATCCCAATGA TACATTTTGT AACGGGTTTG AAGAAGTTCT CATGTGTTAC AGAGAGATTG TTCCGCAGCT CCGTCTTTCA GGTCCGACAT CTTTTGCACC CATCATTGAA AGGGCCATGA CAATTGTGGA AGAAAGTGGT GGCCAGTACC ATGTTCTTCT CATCATCGCT GACGGACAGG TGACAAGAAG TGTTGATACA GATAACGGCG GATTCAGTCC ACAAGAGCAG CAGACTATTG ATGCCATTGT TAGAGCAAGT GAATATCCTT TGTCTATAGT TCTTGTTGGT GTTGGAGATG GCCCTTGGGA CACCATGAGA CAGTTTGATG ACAACATCCC TGCTCGTGCC TTTGACAATT TCCAGTTTGT GAATTTCACG GATATAATGT CAAAGAACAT TGATCCAGCA AGAAAAGAGG CAGAATTCGC GCTTTCCGCC TTGATGGAGA TCCCGTCTCA GTATAAAGCC ACCCTCGAGC TAGGCTTACT TGGACAGAGA ACTGGACATT GTCCAAACAG GATTGCGCTT CCACCACCAA CTTATGCTAC TCAATCTATG CGCAACAGCC CAAGAACTTC CCGATCAACC AGCTTTCAAA ACAGACCATA TGATAATGGT GTTTCCTCTA CACCACCTTC AACTACTCGT AACGAGGGCC AGCAACAGGT TTGCCCCGTA TGTCTAGTGA GTCCAAAGAA CTTGGCTTTC AACTGTGGTC ATCAGACTTG CTCAGAATGT GGGGAGGACC TCAATATTTG CCCCATTTGC CGGAGCTCAA TCTCGGTTCG TATCAAGCTT TATTAAGATA ACCCTCAAGA GCTAAAGGAA CCCAAAGGTG ACCCTGAGAT CATTTACAGC AAACTTCATC CCAACTTAGA TCTCATGACA TTACCAGTGT CCTAGCATTT GTTTTTACTT TGAGCGGAAT ACCCGGCACC TCTCAAAGGT TTGTAGATAA TCTGTTGTCA GTTTTGAATT CTCATTGCAC ATGGAAAAAC CACAGCAGAC TCTCCCGTAA ATAAAGGATC CTTTGGTGTT ACAGATTTTT ACTT 
Length1654
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11967066.. 11969708
Download Sequence
A.thaliana
AGI-codeAT1G67800.2
DescriptionCopine (Calcium-dependent phospholipid-binding protein) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.31662 Ahg483751 transmembrane protein-related
19.3649 Ahg924606 Protein kinase protein with tetratricopeptide repeat domain
32.665 Ahg928658 isocitrate dehydrogenase VI
43.6807 Ahg912305 disease resistance protein (TIR-NBS-LRR class), putative
45.0111 Ahg947849 Calcium-binding EF-hand family protein
48.734 Ahg493128 PPPDE putative thiol peptidase family protein
50.1996 Ahg479802 calmodulin-like 11
60.9918 Ahg490855 calcium ATPase 2
69.1086 Ahg933190 Pleckstrin homology (PH) and lipid-binding START domains-containing protein
76.361 Ahg496551 GroES-like zinc-binding alcohol dehydrogenase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression