Detail



ID : Ahg928658

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928658|scaffold_301115.1
Sequence
AGAGGCTGGA AGCGATGACC ATGGCAGCAT TTCTCGCGAG ACGGCTTATT GGTAACCGAT CGAGCCAGAT TCTCGGGACT TCGAGTTCTA GCTCCGGTGC GTTCATTTCC GTTTCTAGGG CTTTCTTCTC CTCCACCACT CCGATCAAAG CAACTCTCTT TCCCGGTGAT GGGATCGGTC CCGAAATCGC TGAATCTGTC AAACAGGTGT TTACTGCCGC TGATGTGACC ATTGATTGGG ACGAACAGTT TGTTGGTACT GAAGTAGATC CTAGAACCAA TAGTTTCTTG ACTTGGGAAA ATCTTCAATC TGTGCTTAAA AACAAGGTTG GTTTGAAAGG ACCAATGGCA ACGCCAATTG GAAAGGGTCA CCGTTCCTTG AACCTTACTC TTAGGAAAGA GCTGAATTTG TATGCCAATG TTAGGCCTTG CTACAGTCTT CCTGGTTACA AAACCCGTTA TGATGATGTT GATCTCATTA CCATTCGTGA AAACACCGAA GGAGAGTACA GTGGGCTTGA ACACCAGGTC GTCAAGGGTG TGGTGGAAAG TCTTAAAATT ATTACCCGTA AGGCGAGTAT GAGAGTTGCT GAGTATGCCT TTCTTTATGC CAAGACTCAC GGAAGGAAGA AAGTTTCAGC AATTCATAAA GCCAACATTA TGCAGAAAAC TGATGGTCTT TTCCTGCAGT GTTGTGATGA GGTTGCTAAG AAGTATCCTG AGATATATTA CGAGAAGGTT GTTATTGACA ATTGCTGTAT GATGCTTGTG AAAAACCCAG CACTTTTTGA TGTCTTGGTG ATGCCAAATC TCTATGGAGA TATTATCAGC GATTTGTGTG CCGGACTTGT TGGGGGACTA GGACTGACTC CTAGTATGAA TATTGGGGAG GATGGTATTG CCCTTGCTGA AGCTGTTCAC GGCTCTGCAC CTGATATTGC TGGAAAGAAC CTGGCGAACC CAACAGCTTT GCTACTGAGT GGAGTGATGA TGTTGCGGCA CCTGAAGCTC AACAAACAAG CAGAGCAAAT CCACAGTGCC ATCATCAACA CAATAGCCGA GGGAAAGTAT AGAACTGCTG ATCTCGGAGG TACCTCAACC ACAACAGATT TCACAAAAGC CATCTGTGAT CATCTCTAAA CACCCGTAAA AACCAGAATT 
Length1160
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3645528.. 3647870
Download Sequence
A.thaliana
AGI-codeAT3G09810.1
Descriptionisocitrate dehydrogenase VI
TAIR curator summaryEncodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase
Alias[IDH-VI][isocitrate dehydrogenase VI]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg497125 Chaperone DnaJ-domain superfamily protein
12.2474 Ahg943614 Peptidase family M48 family protein
12.49 Ahg483117 appr-1-p processing enzyme family protein
14.2829 Ahg471079 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
16.7929 Ahg473977 Stabilizer of iron transporter SufD / Polynucleotidyl transferase
17.3494 Ahg489011 molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1)
21.9089 Ahg329212 hydroxyproline-rich glycoprotein family protein
22.5832 Ahg496721 Nucleotide-sugar transporter family protein
22.7156 Ahg930446 RNA recognition motif (RRM)-containing protein
23.0434 Ahg332565 Protein of unknown function (DUF167)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression