| Annotation |
|---|
| Description | jgi|Araly1|494007|fgenesh2_kg.7__3440__AT5G39830.1 |
| Sequence |
TTAATTTTAT CCAGGTTTCG ACTGATCTCA GAGTTTTCTT GAATTTTGTG GAAAGATGCA GGTAATAGCA TCTTTCTCTT TGAAACCTAA TGAGAATGAA TTTGTGGGTC GACGACAACT TCTTTCCTCC GCCTGTTCCA GAATTTCTCA AGGCGACGTC GTTTCACACC CACCCGTTTC TTCAGTCAAG ATTACTCGAG ATTGGAAGTC GAATTTACAT GAGTTAGCTA TGAAAAGTGT CCCTTCGACG ACAAGGCGAA TCTTGTTGAC AAGTTTATTC ATGAATTTGT GCTTTAATCC TTCAAGGTAC TTATCAGCCT TAGCACTTGG TGATCCATCT GTTGCGACCG TTGAAGATGT TAGTCCACCT GTTTTCCCAG CTGGACCTCT TTTCCCTACT GAGGGGAGAA TTGTCCAATT GTTTGAGAAA AACACTTATT CCGTTGTCAA CATATTTGAT GTGACATTAC GGCCTCAGCT CAAAATGACG GGTGTGGTTG AGATACCAGA AGGAAATGGC TCTGGAGTAG TCTGGGATGG ACAGGGATAC ATCGTGACCA ATTATCACGT TATTGGCAAT GCCCTTTCAA GAAATCCTAA CCCCGGGGAT GTGGTTGGTC GTGTGAATAT TCTGGCATCT GATGGGGTAC AAAAGAACTT TGAAGGAAAA CTTGTTGGTG CTGATCGTGC TAAGGATCTT GCTGTCTTGA AGGTAGATGC CCCTGAAACC CTCCTGAAAC CGATTAAAGT TGGGCAGTCA AACTCTCTAA AGGTTGGGCA GCAGTGTTTA GCAATTGGAA ACCCGTTTGG TTTTGACCAC ACTCTTACGG TTGGGGTCAT CAGCGGTCTT AACCGTGACA TATTTAGTCA AACCGGAGTG ACCATTGGTG GTGGAATTCA AACAGATGCA GCCATTAACC CGGGAAATAG CGGAGGTCCT CTGCTCGATT CAAAAGGGAA CTTGATTGGG ATCAACACGG CCATAGTCAC ACAGACAGGA ACATCTGCGG GTGTCGGATT TGCAATTCCG TCATCGACTG TATTAAAGAT TGTTCCTCAA CTAATCCAAT TCAGCAAAGT CCTTCGAGCT GGTATTAACA TAGAATTAGC CCCTGATCCA GTAGCTAATC AACTCAATGT TCGTAATGGA GCCCTTGTCC TTCAGGTACC CGGAAATAGT CTAGCAGAAA AAGCTGGATT ACATCCGACA TCCCGGGGTT TTGCTGGTAA CATAGTACTT GGAGATATCA TTGTTGCAGT TGATGACAAA CCCGTGAAGA ACAAAGCCGA GTTGATGAAG ATATTGGATG AGTACAGTGT AGGTGATAAG GTGAATCTTA AGATCAAGAG AGGAAATGAA GATTTGGAGT TAAAGATCTC ACTTGAAGAG AAAAGTTCAT GAAAA |
| Length | 1405 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 21548809.. 21551776 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G39830.1 |
| Description | Trypsin family protein with PDZ domain |
| TAIR curator summary | Encodes DEG8. Forms a hexamer with DEG5 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII). Recombinant DEG8 is proteolytically active toward both a model substrate (beta-casein) and photodamaged D1 protein of photosystem II. |
| Alias | [DEG8][DEGP8][degradation of periplasmic proteins 8][DEG PROTEASE 8] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.245 |
Ahg936128 | uvrB/uvrC motif-containing protein |
| 9.16515 |
Ahg494276 | lon protease 2 |
| 12.8062 |
Ahg493573 | Glucose-6-phosphate/phosphate translocator-related |
| 13.6015 |
Ahg942373 | |
| 25.923 |
Ahg496756 | |
| 26.7208 |
Ahg477758 | zeta-carotene desaturase |
| 29.6985 |
Ahg473284 | Actin-like ATPase superfamily protein |
| 31.1448 |
Ahg496671 | AAA-type ATPase family protein |
| 33.9411 |
Ahg480978 | Basic-leucine zipper (bZIP) transcription factor family protein |
| 34.0441 |
Ahg476019 | WPP domain-interacting protein 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|