| Annotation |
|---|
| Description | jgi|Araly1|476390|fgenesh2_kg.2__1520__AT1G72560.1 |
| Sequence |
ATGGATGACC TTGAACAGGC AATAGTAATT AGCTTTGAAA CTGGTGCTGT TGATTCGGCG TTAAAGTCTC AAGCGGTTAC TTATTGTCAG CAAATCAAAG AGACTACATC GATTTGTAGT ATATGTATTG AGAAGTTGTG GTTTTCTAAG CTTGTCCAAG TTCAGTTCTG GTGTTTGCAA ACGCTGCAGG ATGTTTTAAG GGTTAGATAC GGATCTATGA GCGTGGATGA GCAGAGTTAT GTGAGGAAAT CAGTGTTTTC AATGGCTTGT TTGGAGGTTA TTGATAATGA GAATGCTGTT AGAGTTGTCG AAGGACCTCC ATTTGTTAAA AACAAGCTTG CACAGGTTTT GGTTACTTTG ATCTATTTTG ACTACCCGTT GATTTGGTCC TCGGTGTTTG TTGATTTTAT GCCTCATTTG AGCAAAGGGG CTGTTGTGAT CGACATGTTT TGTCGGGTTT TGAATGCGTT GGATGATGAG TTGATTAGCT TGGATTACCC CCGGACTTCT GAAGAGATAT CTGTGGCTGC TCGAGTCAAG GATGCTATGA GGCAACAATG TGTCCCTCAG ATTGCTAGAG CATGGTATGA CATTGTATCG TTGTACAGGA ATTCCGATCC TGATCTTTCT GCTACTGTGT TAGATTGCAT GAGAAGATTC GTCTCTTGGA TTGACATTGG TTTGGTTGCC AATGATGCAT TTGTTCCACT GCTGTTTGAA TTGATTTTGT CTGATGGATT GTCTGATCAA TTTCGCGGTG CAGCAGCTGG GTGTATTTTA GCCATGGTTT CTAAGCGGAT GGATCCCCAG TCAAAACTGC CCCTTCTGCA GACCCTTCAA ATAAGTCGTG TTTTTGGTTT AGTATCCGGA GATGTTGATT CTGAATTGGT ATCAAAAGTA TCTGCTTTGC TTACTGGGTA TGCTGTTGAG GTTCTAGAAT GCCATAAGCG GTTGAACTCA GAGGACACCA AGGCAGTCTC CATGGATTTG CTGAACGAAG TTCTGCCATC AGTTTTTTAT GTCATGCGGA ATTGTGAGGT GGATTCTACT TTTAGCATCG TCCAGTTTCT CCTGGGTTAC GTTTCCACTC TCAAAGGCCT CCCTGCATTA AAGGAGAAGC AGCTACTCCA CATTACACAG ATTCTCGAAG TGATAAGAAT TCAGATTTGC TATGATCCCA TGTATCGTAA TAACCTTAAT TTACTGGATA AAATTGGATT GGAGGAGGAA GATAGAATGT CCGAGTTTAG AAAAGATCTC TTCGTCTTGT TACGTACAGT GGGCCGTGTT GCTCCTGAAG TTACTCAGCA TTTTATTCGT AACTCACTAG CAAATGCTGT TGATCCTCAT CCGAGAGCAA TGTTGAAGAA GTGGAAGCTG CGCTCTCGCT TTTGTATTCA TTTGGAGAGA TCTGGGTGTT TGAGTGAACT AATTCCGATG CTCTTGACCA CACAGTTCCC TGGACATTCT TATAGACTTG TTGCACTAGT TTACTTAGAA AACATAACAA GGTACATGAA GTTTATTCAG GAAAATTCCC AGTACATTCC CAATGTTCTT GGTGCTTTCC TTGATGAAAG GGGTTTGCAT CACCAGAATG TTCATGTGAG CCGTAGAGCA GGTTACTTGT TCATGAGAGT CGTGAAATTG TTAAAATCAA AGCTTGTACC ATTCATTGAC AAGATCCTGC AGAACCTTCA AGATACGTTG TCCCAGTTGA CGACTTTGAA CTTTGCATCA AGAGAACTTT CTGGAACTGA AGATGGCAGT CACATTTTTG AGGCTATTGG CATAATCATA GGGTTGGAGG ATGTCCCGGC TGAAAAGCAG TCAGATTATC TGTCTTTACT GCTTACCCCT CTCTGTCAAC AGATTGAGGC AGGACTTGTG CAGGCAAAAG CTGCAAGTTC CGAAAATTTT CCTGTGAAAA TTGCAAATAT CCAATTTGCT ATTGTGGCAA TTAATGCTCT CAGCAAGGGC TTCAGTGAAC GTCTTGTTAC AGCGAGTCGT CCTGGAATTG GTCTCATGTT TAAGCAGACA CTGGATGTGC TTCTAAGGGT TCTAATTGAA TTTCCAAAGG TCGAGCCTTT GCGGAGTAAG GTCACATCAT TCATACACCG TATGGTTGAT ACCCTTGGTT CCGCTGTGTT CCCTTATCTT CCCAAGGCTT TGGAACAGCT ACTTGCTGAC AGTGAGCCAA AGGAAATGGT TGGTTTCCTG GTATTACTCA ATCAGCTTAT CTGCAAGTTC AACAGCGCTC TCCGTGATAT ACTGGAAGAA GTATATCCCG TGGTTGCTGA TAGGATTTTC AAAGTAATTC CAAGAGATGG GCTCCCCTCA CGCCCTGGGG CTGTTACTGA GGAATTGAGG GAACTGATAG AGCTCCAAAG GATGTTGTAT ACATTTCTTC ATGTGATAGC CACACACGAT CTCTCTTCTG TATTTCTTAC GCCCAAAAGT ACGGCGTATC TAGATCCTAT GATGCAGCTG CTTTTGAATA CTTCTTGTAA TCACAAGGAT ATTACCGTAC GTAAGGCGTG CGTGCAGATA TTTATTAAGC TAATTAAAGA TTGGTGTGCC AAGCCATATA GCGAGGAGAA GGTTCCAGGT TTTCAGAATT TCGTAATCGA AGCGTTTGCA ACAAACTGTT GTTTGTACAG TGTACTAGAT AAATCCTTCG ATTTCAGTGA TGCAAATACG CACGCGTTGT TCGGAGAAAT CATCACAGCT CAGAAAGTGA TGTATGAAAA ATTTGGTAAT GTGTTTCTCA TGCATATTAT GTCGAAAAGT TTTCCATCAG CACAGATTCC ACAAGATTTG GCGGAGCAGT ATTGCCAAAA GTTGCAGGGT AATGATATCC GGGGCCTCAA GTCATACTAC CAGTCCCTTA TAGAAAATCT CAGGCTTCAA CAAAACGGGA GTCACGTTTT CAGATAGCAT TCGAAATACA GCTAGTTTCA TAGAAAGAAA GGTCTCCCAG GCTTCTCCAG ATGTATATAG TATTGTCAAT GTCTACTTGA GAGGCAACAA GGTTGGCTTT CACCATCCAG ATGGAATTTG ATTAAAAGCT TGATAAAGAT TTCATACTGT TGCTGATGTT GAATTCTTCT CAAATCTGCA GTTGTACCAC CTTACACATA ATCATGTTCT CCGACTCAAC CAAGGCCTTG CAAGTTGTTC CAGTGCACAC ACACTCTCTG AGGCAGATCT GCTGTTATTT CTTTTTGCGC TTTGTTGTGA GATTGTGTCT ATAAAGCCCC AAGTTTTGAT GATGTTACAA CTTTTCTGCA GTCGATGTTT TCTGTTTCTT TGTCCATGAA AATACTTAGA AAACTATGAG AGATCATAAA AGACAGAGAC AAAACAATTT TGGCTGAATT ATGTTTTCCT ATTTTATTCA TTTAATTAAT ATGAAATTGT ATTATTTT |
| Length | 3428 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 14573689.. 14578779 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G72560.1 |
| Description | ARM repeat superfamily protein |
| TAIR curator summary | Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development. |
| Alias | [PSD][PAUSED] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.79796 |
Ahg940314 | peroxisome 1 |
| 13.3041 |
Ahg924940 | WAPL (Wings apart-like protein regulation of heterochromatin) protein |
| 15.3948 |
Ahg483691 | WD-40 repeat family protein / beige-related |
| 18.8149 |
Ahg485401 | CDPK-related kinase |
| 21.2132 |
Ahg493637 | phytochrome C |
| 22.9129 |
Ahg320901 | SecY protein transport family protein |
| 28.775 |
Ahg944085 | GRAS family transcription factor |
| 38.0789 |
Ahg493336 | tRNA/rRNA methyltransferase (SpoU) family protein |
| 41.3763 |
Ahg328440 | glycine-rich protein |
| 45.3982 |
Ahg355153 | arabinose kinase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|