Detail



ID : Ahg476752

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476752|fgenesh2_kg.2__1882__AT1G76030.1
Sequence
AGATTTGAGA TATGGTCCAA CTACGTTCAC AGAGAGACTC GTAAACCATA ACTCTCTCTC TCTCTCTCTC CTCGAATCGA AACTTTCCAG GAACGTATCT TGATTTGGTT TATCTTTGAT CTGTGAAAAT GGGGGCGAAT GATCTCGACA TCGAAGAAGG GACTCTGGAG ATCGGCATGG AGTATAGAAC TGTTTCTGGT GTTGCTGGAC CATTGGTCAT TCTTGATAAA GTGAAGGGTC CAAAGTACCA GGAGATTGTT AATATTCGTT TAGGAGATGG ATCAACGAGA CGTGGCCAGG TTTTGGAAGT TGACGGAGAG AAAGCAGTTG TGCAGGTTTT TGAAGGAACA TCTGGAATTG ACAACAAGTT TACCACCGTG CAATTCACAG GAGAGGTTTT GAAAACTCCT GTGTCATTGG ACATGCTTGG GCGCATATTT AACGGTTCAG GAAAGCCGAT TGATAATGGC CCTCCTATTT TGCCAGAGGC ATACCTTGAT ATCTCAGGAA GTTCAATCAA CCCCAGTGAA AGAACCTATC CCGAAGAGAT GATACAGACA GGAATTTCCA CCATCGATGT CATGAATTCC ATTGCTCGTG GACAGAAGAT TCCGCTTTTC TCTGCTGCTG GTCTTCCACA TAATGAAATA GCTGCTCAGA TTTGTCGTCA GGCTGGTCTT GTCAAACGTT TGGAAAAGAC TGTTGATCTA CTTGAGGATC ATGGAGAGGA CAATTTTGCA ATTGTGTTTG CAGCTATGGG TGTGAACATG GAGACAGCTC AGTTCTTCAA GCGAGATTTT GAAGAAAATG GATCAATGGA GAGAGTTACT CTTTTCCTGA ACCTGGCCAA TGACCCAACG ATTGAGAGAA TCATCACTCC TCGAATTGCC CTCACAACAG CTGAATATCT GGCTTATGAA TGTGGGAAAC ACGTCCTTGT TATATTGACA GATATGAGTT CTTATGCTGA TGCTCTTCGT GAGGTTTCCG CTGCCCGAGA AGAGGTTCCC GGAAGACGTG GATATCCAGG TTATATGTAC ACTGATCTTG CAACTATTTA TGAACGTGCT GGGCGTATTG AAGGAAGAAA AGGTTCCATC ACCCAAATCC CAATCCTCAC TATGCCCAAT GACGACATCA CTCATCCAAC TCCGGATCTT ACTGGTTACA TTACTGAAGG TCAGATATAT ATCGATAGGC AACTGCACAA CAGACAGATA TATCCACCCA TCAACGTGCT TCCATCCCTT TCTCGTTTAA TGAAGAGTGC TATTGGCGAG GGCATGACTC GTAAAGATCA TTCAGATGTG TCGAACCAGC TGTATGCGAA TTATGCAATC GGGAAAGATG TTCAAGCGAT GAAAGCTGTT GTTGGAGAAG AAGCACTTTC TTCAGAGGAT CTGCTTTATC TAGAGTTTTT GGATAAGTTT GAGAGGAAGT TTGTAATGCA AGGAGCTTAT GACACACGCA ACATTTTTCA GTCGCTGGAT TTAGCTTGGA CATTGCTCCG TATCTTCCCA CGGGAGCTTC TTCACCGTAT CCCTGCAAAG ACACTTGACC AATTCTACAG CCGCGACTCA ACCACTTAAA ATGAGGTAAT GGAGGTTATC TTATCGAAAC TCTTTTGAGA GGAAAAGTGT GAATTTTGTG ATGTCTATTA TTTGGTGCGT ATTTTATAGA GGAAAACAAA GAAGAGCTAT ATATTCCGTC TCTCCATATC TGGTGATATT TTTTTTGGTT CTGTTGTGTT CCACAGTGAA AATAAAAATC GATAAAACGA TGTCGTATTG TATTACCTTC CCTTTTTTTG TACGAATTTG TTGAGTTTGG TTCATAAATG GGATTATAA 
Length1849
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15999870.. 16003198
Download Sequence
A.thaliana
AGI-codeAT1G76030.1
DescriptionATPase, V1 complex, subunit B protein
TAIR curator summaryEncodes the vacuolar ATP synthase subunit B1. This subunit was shown to interact with the gene product of hexokinase1 (ATHXK1). This interaction, however, is solely restricted to the nucleus.
Alias[AtVAB1][VAB1][V-ATPase B subunit 1]
Gene coexpression
MR
MR Locus Description
6.48074 Ahg495887 MIF4G domain-containing protein / MA3 domain-containing protein
20.7846 Ahg477133 Protein kinase superfamily protein
23.1517 Ahg948444 conserved peptide upstream open reading frame 24
23.7908 Ahg922878 SEUSS transcriptional co-regulator
27.1109 Ahg477585 DegP protease 7
29.189 Ahg927681 Insulinase (Peptidase family M16) protein
35.4965 Ahg488184 phospholipid:diacylglycerol acyltransferase
37.3229 Ahg938548
48.4768 Ahg496602 phosphatidylinositol 4-OH kinase beta1
53.5817 Ahg477706 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression