Detail



ID : Ahg476796

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476796|fgenesh2_kg.2__1926__AT1G76400.1
Sequence
AAGCGAGTTC GGAGACTGGT TGGAAAAATC TGACAAGGAT GAAGCAATCG AGTGTCGTCG ATCTGTTGCT TCTTCTGCTG GCGATCGCTC TTCTTGCGAC GCCGGCGTTC TCCGATCTGG TTTTATCCAA AGTCGAACGT CGTATCGATG TGACTTCACA GATTGCTCGC GTTACTAAGA CTCTTAAGGT CGTCAATTCT GGCTCTGAAT CAATTTCTGA GTTTATTTTG ACCTTCCCAA AGTTTCTTGG GAACAACTTG GCTTATTTAT CGGTTTCCCA TAGTGAGGGA AAGGGGAAAT CTAAACGTAC GTTAGTCAAT CTCTCTGTGA GAGAAGCTGA TTCGAAAGGA ATACCCGATT CAATTAGTGT TTACTCTGTT ACATTACCCA AATCACTCAG TAAAGGCGAT ACTTTGACGT TGGAGGTGGT TGCTGCATTC ACCAATGTAC TTCAGCCATT TCCGGAGAAG ATTACTCAGG GTGAAATCCA TCTTGTTATG CTCCAAGAAA GTGCACAGTA TCTCTCTCCT TACGCGGTTG AGTCTCAGTC TTTGTCTATC AAACTACCCA ATGCCAGAAT CGAATCTTAC ACCAAATTGG AGAATACAAA GCTCCAGGGA TCAGAGCTTA AATATGGCCC ATACAAGAAT CTCCAGTCGT ATTCATACTC TCCCGTAGTT GTCCACTTTG AAAGCAAGGC TGCATTTGCT GTGGCTGAGA ATCTTGTGCG AGAGATAGAA GTGTCTCATT GGGGGAATGT ACAGGTCACG GAGCATTACA ATGTTGTCCA CCGAGGGGCT CAACTCAGGG GAGAGTTTTC AAGGTTAGAC TTTCAAGCCA GACCTAATCC CCGAGGAGCA TCTGCCTTTA GGCATTTACT TGCTAGATTG CCCCCCAGAG CCCATTCCAT ATATTACAGG GATGATATTG GAAATATCTC CACGTCTGAG ATGCAAAGTG ATTCGAAAAA GACAGAGCTA CTAATTGAGC CTAGGTTTCC TTTGTTTGGT GGGTGGAAAA CTTTTTTCAC GATAGGTTAT GGTTTGCCAC TTAGCGACTT CTTGTTTGCT TCGGAAGGAA AGCGATTCCT TAATATCTCC TTTGGCTCCC CTATTCTTGA CCTTGTCACT GAAAAACTTA TTGTACAGGT AGTTTTACCC GAGGGGTCAA AGGATATATC AGTTGCCACT CCATTCACTG TCAAGCAGTC TCAAGAGATC AAATATTCAC ATTTAGATAT AGCTGGTAGA CCAGTTGTTG TGCTCGAAAA GAACAACGTT GTTCCAGATC ACAATCAGCA TGTCCAGGTC TACTATAAGT TCAGCAACAT CAATCTGCTG AGTGAGCCAT TGATGTTAAT CTCTGGATTT TTCTTTTTGT TCATCACTTG CATCATATAC ACACGGGCTG ACTTCTCAAT CTCCAAGTCC TCTCCGACAT ACTTGGCAAA ACTTCAATGG GATGAGGTCC TAGCAACACT CCAGGAAGTC CAAAGCATCA TCCAAAAATG CTTAGCTACA CATGATAAGC TTGAAGCATC GCTGCGTGAT CTCTCAAGAA CCGGTGACAT TCAAACCTGC AAAGCAGCTC GCAAATCCAC TGACAGTTTA CTGAAAGATT TTTCGAAAGA ACTGAAACCA TTGCTGGGTT TCTTACAGTC TTCCCCTATA GCCTCTCACA TATCTCCAAA GGTCGAGGAG CTAGTTGCGA AAGAGAAAGA ACTTGAAGAG AAGTTAATGG CCAAACATAC CACTGTTGTT GAAGGGTATG AAAAGAAATC CTCAGGGCGT GATATCGAAA ACCGGATTGC TTCTCAGCAG CAAAAGATCA TAGCTTTGAG GCAAGAAATT GAAGATCTTC TAGAATTCAT TGATGAGATC TAGAAAAGTT AAATGTAGCA GATCCTCTTA AGCTTAAATA CCAGACTTTT GAATGCACTA CCTTTAGAAA TTTTTTGTTC CTTAATGAGC AGTGTTTATC AACTTTGAAA GACAGCTCTA GTTTCTCTGA GTTTAACAAA TGAATCAAAT TATCTT 
Length2036
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16148687.. 16151857
Download Sequence
A.thaliana
AGI-codeAT1G76400.1
DescriptionRibophorin I
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.69042 Ahg470642 Ribosomal protein S5/Elongation factor G/III/V family protein
5.2915 Ahg336036
5.83095 Ahg892422 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
6.7082 Ahg477224 PENTATRICOPEPTIDE REPEAT 596
12.2474 Ahg477059 vacuolar H+-pyrophosphatase 2
15.4919 Ahg921765 nuclear transport factor 2A
20.4939 Ahg470466 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
24.2487 Ahg471010 calreticulin 1b
27.7128 Ahg918979 splicing factor Prp18 family protein
31.4484 Ahg476916 PDI-like 1-2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression