Detail



ID : Ahg476859

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476859|fgenesh2_kg.2__1989__AT1G76990.4
Sequence
ACAGAAAGAA GGGTTTCAAT CTCATTAAAG AGAAAAGAAA CGATTAGAGA AAGAGAAGAG CTTCTTCTTC TTCTGTGTCT CTCTGGTCTG TCTCTGTGTA ATCTCTGTTT CTTTAAATTC GTCTCTCCTC TTCTCTCTTG CTGACTCCAC AAAATTTGAG CTTTTTTTTT GAAGTTCTTG AGAACAAGTG AAGAGCTTAA TATCCACAAG ACTCTCTTGT TTCTTTGTTA AATGGCTAAA GTTTATTGGC CGTATTTCGA TCCTGAATAT GAGAACTTGA GCACCAGAAT CAATCCTCCA AGTGTTTCTA TAGATAACAC TAGCTGCAAA GAATGCACTC TTGTCAAGGT GGACAGTATG AACAAACCTG GAATACTGCT GGAAGTTGTG CAAGTCCTTA CCGATCTCGA TCTCACAATC ACCAAAGCAT ATATCTCTTC TGATGGTGGA TGGTTCATGG ACGTATTCCA TGTCACTGAT CAACAAGGAA ACAAGGTTAC TGATAGCAAA ACCATTGATT ACATCGAGAA GGTTTTAGGA CCAAAGGGTC ATGCTTCGGC TTCACAAAAC GCTTGGCCTG GTAAAAGGGT CGGTGTCCAT TCATTAGGCG ACCACACATC GATAGAGATT ATTGCTCGTG ATCGTCCTGG TCTCTTGTCT GAGGTCTCAG CCGTACTAGC AGACCTCAAC ATCAATGTGG TGGCTGCTGA AGCATGGACT CACAACCGTA GGATCGCGTG TGTCCTCTAT GTGAATGACA ATGCAACTTC TAGAGCCGTT GATGACCCAG AAAGATTGTC TGCCATGGAA GAACAGCTCA ACAACGTGCT GCGTGGGTGT GAACAAGAAG ATGAGAAATT TGCTCGGACG AGTCTCTCCA TTGGGTCAAC TCACGTTGAT CGAAGGCTTC ATCAGATGTT TTTCGCTGAT AAAGACTATG AAGCAGTGAC CAAGCTTGAT GATTTTGCTT CTCGTGGACT CGAGCCCAAA ATCACGGTTG AGCATTGCGA AGAGAAAGGT TACTCTGTGA TAAACGTGAA CTGCGAGGAT CGACCAAAGC TCATGTTTGA CATTGTATGC ACGCTTACGG ATATGCAATA CATTGTGTTT CACGCCACGA TTTCATCAAG CGGCTCTCAT GCTTCTCAGG AGTATTTCAT TAGACACAAA GACGGTTGCA CTCTTGACAC AGGAGAGAAA GAGAGAGTTA TCAAATGTCT AGAAGCCGCA ATCCATAGAC GAGTCAGCGA GGGTTGGAGT TTAGAGCTCT GCGCAAAGGA CAGAGTTGGA TTACTGTCGG AAGTGACAAG GATTCTGAGA GAGCACGGGC TATCAGTGTC GAGAGCTGGT GTGACAACAG TAGGAGAACA AGCCGTCAAC GTTTTCTATG TGAAAGATGC TTCAGGGAAT CCAGTGGACG TGAAGACGAT TGAGGCGTTA CGCGGAGAGA TCGGACACAG TATGATGATT GACTTCAAGA ATAAAGTTCC GAGCAGAAAA TGGAAAGAAG AAGGTCAAGC CGGAACAGGA GGAGGATGGG CCAAAACCAC TTTCTTCTTT GGGAATTTGC TGGAGAAGTT GCTGCCTTGA GAGAAAAGGG ATTTTGGTGG TTTGCCCGAA ACTAAACCGA ACCAAAACTG GTTTTCGGTT ACTTAGTCAT AGTAAAATGA ACATGTCTAT AAAAGAATAA TATGCAACTC TTCCTATTGG AAGGCTTGCT TTTGTCTATG TAATATCGAT CCTTGTTATG TATTATCTTT GGCCAAATGT GATATTTTCT GTAGTTTAAT CTCTTCTTTC CCTTCTATTT TGTAACTTCT TTGAATCTTG AATATCAATA TCATTGCAGT GAGAAAAATG GA 
Length1862
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16453803.. 16457227
Download Sequence
A.thaliana
AGI-codeAT1G76990.1
DescriptionACT domain repeat 3
TAIR curator summary
Alias[ACR3][ACT domain repeat 3]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg921072 Protein of unknown function, DUF617
13.8564 Ahg481882 Tetratricopeptide repeat (TPR)-like superfamily protein
15.5563 Ahg480999 MATE efflux family protein
21.8403 Ahg480944 Arabidopsis phospholipase-like protein (PEARLI 4) family
26.7208 Ahg945248 CCT motif family protein
28.4605 Ahg891481 COP1-interactive protein 1
29.2916 Ahg497012 ankyrin repeat protein
32.4346 Ahg493941
37.9737 Ahg491400 gamma vacuolar processing enzyme
38.3275 Ahg474234 A20/AN1-like zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression