| Annotation |
|---|
| Description | jgi|Araly1|477227|fgenesh2_kg.2__2357__AT1G80260.1 |
| Sequence |
TGGCAAGCTG GTTCGATTTC CCTCGTATGT TGTGCTATGG GAATCAAAAC TAACATGGAG TCGTTGCTTC GAACTGATCG CGTAGAAACC CTAATTCCTG GAGCGGTGTG TAGTCACTCA GAACTGGCCC TTCCCTCAGT GAGCGTGACT GAATTGGATC TGGTGAGAGG TCTATTGCAA GGTCTGTCTA GTCCCTTCCT TTTCTGGGAC CAAACTGGAC AAACTTTCCG CGCCAAAAGT CATATACGCG TCTCCCATTT GTCTCACTCA AGCCTTCACG TCCTTCTCGC TGGATTCTTG TATGCCGCTA CTTGTTTGAA GCTCGTGGAG TCTATCGTTG CTGCCATTAA TACCTCTCTC AGCTCTCCTC CTACCTTAAT GGCGTTCTCT GACTCTGTCT CCGCATGGCT TGAGAGACTC AGAGATATTG CTTTGAAAGA GGAAGTGATG ATCAACAATT CTGATATTAC TGTTACTCCA ACCCTCTTGG GATTGACAAG TTCTTTATCT AGTCTTTGTT CAGGTGCTGA ATATCTCTTA CAAGTTGTAC ATGCGGCGAT CCCTCATACG TTTTTTGATT CAAGTTCAAC TATTTCCGCT GCTGAAATTG CTTTCCATGT TCTTGATTAC CTTTACAAGA AGCTGGATGA AGTATGCCTT GTACAAGGTG GTGAGGTGGA AGGATTTCAC ATGCTGTTGC AAATGTTTGC TGGAAGTTTA TTGCCATATA TAGAGGGTTT GGATTCATGC TTGTTTGAGG GAACACTTGA TGATCCTTGT GAAGAGTTGT TTTTTACAGC CAACCAATCG GTCTCCGTTA ACGATGCAGA GTTTTGGGAG AAAAGCTATC AGTTGATGAA GGTGCCCAAC CCAAAATCAA ATGTAACTTC CCTAAATGAA AAGAAAGTAA TGAGTGGACA TGACGCCAAC TCGTCTTTAG TTTCTGACAA AGACAAAGAG CAGAATACTG GGGTGTTATG TCCATTGTTC ATTAAAGACA TCTGTAAGTC TATTGTTTCT GCTGGAAAGT CACTGCAGCT GATGCAGCAT ATTCCTTCCA CGTCTTCAGA AAATTCTGGA AAGACTCAGT TCCATGAGCG AAATGGTTTT GGGAATTCTG GCTGTGGTAG ACTCCTGGCT AAAAAGAGTA GCTTTAGTAG CACTGCAGAC TTATCCTTGT CTGAAGTCTT TTGTTTGACA CTCGCCGGCT TTATAGGCCA TGGTGATCAT GTCTCTAGAT ATCTGTGGAA AGATGAGGCG GACAAGTGGG AGATTTCTCC AACTTTAGCA TCATATATAA GTGGAGAGCT TGTGAATGGC ATGGATGATA AAGATCTTCC AGTTCTCACA TGCTCAGAGC GAATGTGGTA TAAGTTGTTG GTTGATGCTC TGCAAGAGAA AAGAGCTATG GAGGCCAAAT CAGAACTCCA GAATGCATGT TATGCTACAG GTGTTAAGGA TGGAAATAGT GGTCTCACTG CCCAAAAGGC GTTGCAGGGG TTGTTCTGTA ATGAAAACCT TGTTGTGTCA GTATCTAAAA TGGATCTTGA GAGGAATAAA AATACTTGGA ATGTCTTGAA CTTGTCACAA AACTATTGTC TACCCTCTCT TAATGATGAG AGTCTGTTGA GTGCTGTTTT TGAAGAATCT GGCGTGGCAG ATGCTGGATT GAGTGGAACA AACTACAAAT TTGGTTTCCA GTTTGGTAGA TCTGAATATC TTTCTTCTCA GGATGACACC AGAATTCTAG AAACATTATT TCCCTTTCCT ACTTTGCTTC CGTCATTACA GCCGAAGCTC CATCTGTCAG AATTCTTACC TTTCCAAAAG AATAGTACAC TTCCTTCAAG AGTTCTCAGC TGGTTGCTAA AGGCAGAGCC AATGGATACT CGACTTCCCG TTGTAATTAT GCAGGAATGC TTCACAATTT ACATCAGGAG GCAGGTGGAC TACATTGGCA AAGTGATTTT GTCAAAACTT ATGAATGACT GGAAATTGAT GCACGAACTT TCTGTATTGC GTGCCATTTA CTTGCTAGGT TCAGGGGACC TGCTGCAGCA TTTTCTGACT GTCATTTTCG ATAGGCTGGG CAAGGGAGAG TCATCAAATG ATGATTTTGA GTTGAACATA ATACTTCAGG AATCAATTAG AAATTCAGCT GATGCCATGC TTTTAAGCAG TCCTGATTCA TTGGTGGTAT CTATATCCAG AGAAGACAGA GACAAAGATG ATAAGGGTGA CATAATACCC CTTTCTTCAA CTCGTAAAAG CCGCGTTAAC AGCTTTGGAA TAGATTGTCT CGAGTCTCTC AAATTCACAT ACAAGGTGCC ATGGCCGCTT GAGCTTATTG CCAATAGTGA GGCCATTAAG AAGTATAACC AGGTGATGGG ATTTTTGTTG AAGGTCAAGC GAGCAAAATA TGTGCTTGAT AAAGCACGAA GGTGGATGTG GAAGGGCAAA GGCTCTGCAA CAAAAATTCG CAAGCACCAC TGGTTACTGG AACAAAAGCT CCTCAACTTT GTGGATGCTT TTCATCAATA CGTAATGGAC AGGGTATATC ACACTGCGTG GCGTGAACTG TGCGAGGCGA TGGTAAAAGC AGGGTCTCTG GATGAGGTCA TATATGTACA TGAGACCTAC TTGTTATCGA TTCAGCGGCA ATGCTTTGTG GTTCAAGAAA AGCTGTGGGC AATCATTGCA AGTCGGATCA ACATGATTCT CGGTTTAGCT CTAGAATTCT ACTCAATACA ACAGACACTG AGCAGCGGTG GAGCAGTTTC AGCCATCAAG GCTAGATGTG AAATGGAAAT AGACCGCATC GAGAAACAAT TTGAGGACTG TATTGCTTTC CTCCTCAGAG TATTATCTTC GAAGCTGAAT GTGGGACACT TCCCTCATTT GGCTGATTTG GTGACCAGAA TCAATTACAA TTATCACTAC ATGTCAGACA CTGGAAGCTT GATGACTAGT GCTGGAGCAG AGACCAACTC ATCCAGACCC AAGACTGCCA AATCTGATGT ATGAATGGAC CGGGAATTTA TCGGAAATGT TGGATCGTCG CAACCTGTTT ATAAGATTCA CTATTTTGAA TTAGATATTT GTACAAAAAT GCTATCAAGG TTT |
| Length | 3123 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 18022931.. 18027758 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G80260.1 |
| Description | Spc97 / Spc98 family of spindle pole body (SBP) component |
| TAIR curator summary | |
| Alias | [emb1427][embryo defective 1427] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg481556 | Putative methyltransferase family protein |
| 3.87298 |
Ahg496995 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 4.89898 |
Ahg351421 | Beta-galactosidase related protein |
| 9.38083 |
Ahg481710 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain |
| 9.53939 |
Ahg484766 | chromatin remodeling 38 |
| 9.94987 |
Ahg480561 | Transducin family protein / WD-40 repeat family protein |
| 10.4881 |
Ahg941232 | Protein prenylyltransferase superfamily protein |
| 11.1803 |
Ahg344326 | RED family protein |
| 12.9615 |
Ahg943542 | Protein kinase superfamily protein |
| 23.7487 |
Ahg488961 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|