Detail



ID : Ahg477275

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477275|fgenesh2_kg.2__2405__AT1G79890.1
Sequence
ATGACGGAGA AACGAGAGTT CCCGGCGTTT CCATACAAGC CGTACTCGAT CCAAATCGAT TTCATGAATG CGCTCTATCA GTTTCTCGAC AAAGGAGGCG TCTCCATGCT CGAAAGCCCT ACCGGGACTG GAAAATCTCT AAGCATTATC TGCAGTGCTC TCCAGTGGCT GATTGACCGC AAGGAGAAAC GAAACTCAGA ATCAGAATCC CACAAGGTTG ATGGCAACGA TGATGAGGAC GAGCCCGATT GGATGCGAAC TTTTACTCCC AACGAAGAAG ATAGAGCCAG TGATGACAAA TCCCCATTTC CGCTCAGGAA GGAAAGACTT CCCCAAGTTT TCTCTAACCC CACGGAAGGG GACGACGATC AAGAATTTTT GCTGGAAGAA TACCAAAGCC AAGATGAATC ATCCCCGGGC GGAGGCAACT CTAAGAGAAA ACCTGCCCGA GCTTTTGACA CTTCATCATC AGAGGATGAG GATGACTGCT CCGATGACGA ACAATGCTTC AAGGTTTTCT TTTGCAGCCG CACACATTCA CAGCTTTCCC AGTTTGTCAA GGAGTTGAGG AAGACTGTGT TTTCCTCAAA ACTCAATGTT GTCTGTCTCG GCTCCCGAAA GAACTTGTGC ATTAACGAAG ATGTTCTTAA GCTTGCGAAT GTGACCCGAA TCAACGAGAG CTGCTTGGAC TTGCAAAAGA AGAAGAAATC TCAAGTCTCT AAAAAGAAGA ATTTAGGTGC AAATGTAAGA ATAGGACGAA CCAAAGCTTC TTGCGGATGC CCACTGCTTA GAAAACATAA ACTACAGAGA GAATTCAAGG CTGAGAGTTT TCAACAAGAA GCCATGGACA TTGAGGATCT TGTTCAGCTT GGACGACAAA TGAGAACTTG TCCATACTAC GGTTCTAGAA GAATGGCCCC CGCAGCTGAT CTTGTTATTC TTCCATATCA GTCTCTTCTA TCAAAGTCCT CACGAGAATC TCTTGGCCTA AGCTTGAAAA ACAGTGTTGT TATCATAGAC GAGGCTCACA ATTTGGCTGA CATTCTTCTC AGTATGCACG ATGCAAAAAT AACACTGTCA CAGTTGGAGG ATATACAGTG CAGTATAGAG AGTTATCTGG GAAGATTCCA GAATCTCTTG GGAGCTGGAA ACCGGAGATA TATCCAAATT ATGTTGATTC TTACCCGAGC TCTCCTCAAA CCTCTTGCTA GTGATTGGAA TCTGAACAGC GTAAATGTTG GGCTTGATAC TGGAAACCCC TCGAAAAGCA AACCTTGTGG TGCTTGTTCG ATGGCAATAA ATGACTTTTT ATTTTCTCTG AATATAGACA ACATCAATTT GGTCAAATTA CTCGCCTATA TAAAGGAAAG CAATATCATT CATAAGGTCA GTGGATATGG AGAGAGAGTT GCTATGTTGC AGAAAGATCC AGTGGCTCAT GAGGAAATGA GCAAGTTAAC AAGTTTTAGA GCGTTTTCTG ATATGTTGGT GGCGCTTACT AATAACAATG GTGATGGGCG GATAATAATC TCAAGGACGA GTTCGTCTGC CTCTGGCCAA CAAGGAGGGT ACATCAAATA TGTCATGCTC ACTGGAGCGA AATTATTTTC GGAGGTGGTG GATGAAGCGC ATGCTGTCAT ATTGGCCGGT GGGACTCTTC AACCTATAGA AGAGACAAGG GAACGACTCT TTCCATGGCT ACCATCAGAT CAGCTGCAGT TCTTCTCATG TAGTCACATT GTTCCTTCTG AGAGCATAAT GCCAATTGCA GTTTCACATG GTCCTTCTGG TCAGTCTTTT GACTTTAGCC ACAGTTCAAG AGGCTCAACA GGAATGATAC AGGAGTTAGG ACTCTTAATG AGCAACCTGG TGGCAGTGGT TCCTGAAGGA GTTATCGTCT TCTTCTCCTC CTTTGAGTAT GAAACACAGG TGCACACAGC GTGGAGTAAC TCAGGGATAC TCAGAAGAAT AATGAAGAAG AAGCGTGTGT TCAGAGAACC CAGAAGAAAC ACTGAAGTAG AAGCTGTCCT CAGAGATTAC AAGGAAGCAA TAGAAAGCGA AAGAGGGGCA ATAATGCTAG CTGTGGTTGG TGGGAAGGTG TCAGAAGGAA TCAACTTCAG CGACAGCATG TGTCGGTGTG TTGTGATGGT TGGTCTGCCG TATCCCAGCC CGTCTGACAT TGAGTTGTTA GAGAGAATAA AGCATATAGA AGGTCTTGGA GATTCAGATT CCGTAAAACC TTCTGTGACT TTGGTTGATG ATTCTTACTA CAGTGGAGAT GTTCAAGCAG GATTTGGCGT GTTAAAGAGC TGCAAACGGA GAGGAAAAGA ATACTATGAA AATCTGTGTA TGAAAGCGGT TAACCAATCA ATCGGTAGGG CAATCAGACA CGAAAAGGAC TATGCATCCA TTTTACTGGT AGATGCTCGA TATTCTAATG ATCCATCCAA AAGAACATCT CATTCTCATC CATCCAACAA GCTCCCAAAG TGGATCAAAG ATTGTCTTAT TTATTCCACC AAAGGCTATG GAGATGTTCA CAGACTGTTG CACCAATTCT TTAAACATAA AAATGTTGAA AATTCATCCG AAACCAATCA GCACTAG 
Length2607
Protein Sequence
Protein Residue
Map Locationscaffold_2: 18164752.. 18168267
Download Sequence
A.thaliana
AGI-codeAT1G79890.1
DescriptionRAD3-like DNA-binding helicase protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.8327 Ahg936241 Protein of unknown function, DUF617
31.7648 Ahg478024 GTP-binding family protein
34.6699 Ahg490600 MATE efflux family protein
37.1483 Ahg920736 PEBP (phosphatidylethanolamine-binding protein) family protein
39.7995 Ahg496305 P-loop containing nucleoside triphosphate hydrolases superfamily protein
40.8901 Ahg922631
42.8952 Ahg490602 expansin-like A2
47.55 Ahg917774 zinc finger (C3HC4-type RING finger) family protein
47.9062 Ahg313269
48.2804 Ahg335256 ATP binding microtubule motor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression