Detail


ID : Ahg480837

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480837|fgenesh2_kg.3__3538__AT2G18940.1
Sequence
AATGGACGGA GCACTCTTCC CTCACAAACC TCCATACCCA ATTCAATCCA AAAGATCTCC ACCACCTCAA TCCTCTAACC AATCCATCAA ATTCAGCTCC GCTACACTTC ACTTACCTCC TCCTTCTCCT CCTTCTTTCC CTCTCGATTC TCTTCTTCAC CATCTCGTTC ACCTCTCTTC CACGCCTCCA CGACATGCCG CTGCTCGTTT CCCTTCTCTC CAAGTCTCCA CATCATCGGC TCATAAATGG CGTCACGAGT CGACGAAACC CATGTCGAGT TCTGTTCTGG GTGTTGAAAT TGAGAACGAG AGAGATGGGT CTTTGAAGCT ACTGTGTAAG AAAGAAGTTG TCTTGGTTAA TTCCATTGTT GAACAGCCTT TGCCAAGGTT AAGCAGTTTC TTCGATTCGG TGAAATCTGA ATCGCTTAGA ACTGATTTGG TTAGTTTGGT TAAGGGTCTG GATGATTCTG GGCATTGGGA AAGAGCTGTT TTTTTATTTG AATGGTTAGT TTTGTCTTCG AATTCCGGAG CTTTGAAGCT AGATCATCAT GTTATCGAAA TCTTAGTTAG GATTTTAGGT AGAGAATCTC AGTACTCTGT TGCAGCTAAG TTGCTCGATA AAATTCCTCT ACAAGACTAT ATGCTCGATG TTCGTGCTTA CACGACGATC TTACATGCGT ATTCACGGAC AGGGAAGTAT GAAAAGGCTA TCGATTTGTT TGAGAGGATG AAAGAGATGG GTCCTTCACC TACTTTGGTG ACTTACAATG TGATTCTCGA TGTTTTCGGG AAAATGGGTC GATCTTGGAG GAAAATTCTT GGGGTTTTAG AGGAAATGAG AAGCAAAGGA TTGAAGTTTG ATGAGTTTAC TTGTAGTACT GTGCTATCTG CTTGTGCAAG AGAAGGTTTG TTAAGAGAGG CCAAGGACTT TTTCGCTGAA CTTAAGTCAT GCGGCTATGA ACCTGGAACT GTAACTTACA ATGCTTTGTT GCAAGTTTTT GGTAAAGCAG GAGTTTATAC AGAAGCATTG AGTGTTTTGA AGGAGATGGA GGAAAAAAAC TGTCCAGCTG ATTCCGTGAC ATACAATGAG CTTGTTGCCG CTTATGTTAG AGCCGGTTTT AGCAAGGAAG CTGCTGGTGT CATTGAGATG ATGACGCAAA AGGGTGTAAT GCCAAACGCA ATCACTTATA CTACAGTGAT AGATGCATAT GGAAAGGCGG GAAAAGAGGA CGAGGCTTTG AAGCTGTTTT ATAGTATGAA AGAAGCTGGT TGTGTTCCGA ATACTTGCAC CTACAATGCA GTGCTTAGTA TGTTAGGGAA AAAGTCGAGA TCCAATGAAA TGATAAAGAT GTTATGTGAT ATGAAGTCTA ATGGGTGTTT CCCTAATCGG GCCACTTGGA ACACAATGCT TGCTCTGTGT GGGAATAAAG GTATGGATAA GTTTGTGAAC AGGGTGTTCC GTGAAATGAA GAGCTGCGGA TTTGAACCTG ATAGGGACAC ATTCAACACG CTGATTAGTG CTTATGGGCG ATGTGGTTCA GAGGTTGATG CATCAAAAAT GTATGGTGAG ATGACAAGAG CAGGGTTCAA CGCTTGTGTT ACAACTTACA ACGCGTTACT TAATGCCTTG GCTAGAAAAG GAGATTGGAG ATCGGGCGAG AATGTGATTT CCGACATGAA AAGTAAAGGT TTCAAACCCA CTGAAACATC TTATTCCTTG ATGCTTCAGT GTTATGCTAA AGGAGGGAAC TATCTAGGAA TAGAGAGAAT CGAGGAGGGG ATAAACGAGG GCCAAATATT CCCGAGCTGG ATGCTTTTGA GAACACTACT TCTCGCAAAC TTCAAATGCC GAGCACTAGC GGGATCAGAG AGAGCATTCA CGTTGTTTAA AAAGCACGGA TACAAACCCG ACATGGTGAT TTTCAACTCA ATGCTCTCCA TTTTCACGAG GAACAACATG TACGATCAAG CAGAGGGGAT TCTTCAGTCT ATCCGCGAGG ACGGGCTAAA CCCGGATCTT GTAACCTACA ACAGCCTCAT GGACATGTAC GTAAGAAGAG GAGAGTGTTG GAAAGCCGAA GAAATCCTCA AGACTCTAGA AAAATCCCAG TTAAAACCGG ACCTGGTCTC TTACAACACG GTGATCAAAG GTTTCTGCAG AAAAGGGTTG ATGCAAGAAG CGGTTAGGAT GCTCTCTGAG ATGACAGAAC GAGGAATCAG ACCATGCATA TTCACTTACA ACACGTTTGT TTCGGGTTAC ACGGCAATGG GAATGTATGG AGAGATAGAA GATGTGATTG AGTGCATGGC GAAGAATGAT TGCAGACCAA ATGAGCTGAC TTTTAAGATG GTTGTGGATG GTTATTGCAG AGCAGGGAAG TATAGTGAAG CTATGGATTT TGTATCCAAG ATTAAGACCT TTGATCCTTG CTTTGATGAT CAGTCTATTC AACGGCTTGC TCTTCGAGTA CGTGAGAATT TAGAATCCTA ATAATAATAC ATGTTTCTAC TCTTT
Length2515
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22249226.. 22254100
Download Sequence
A.thaliana
AGI-codeAT2G18940.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.2915 Ahg485819 GRAS family transcription factor
5.47723 Ahg929218 Tetratricopeptide repeat (TPR)-like superfamily protein
12.49 Ahg925447 RNA polymerase subunit alpha
15 Ahg471430 P-loop containing nucleoside triphosphate hydrolases superfamily protein
16.4317 Ahg495320 Class II aaRS and biotin synthetases superfamily protein
16.7332 Ahg477305 DEAD/DEAH box helicase, putative
16.9115 Ahg326886 DEAD box RNA helicase (RH3)
17.1464 Ahg943476 translocon at the outer envelope membrane of chloroplasts 159
17.6635 Ahg488256 Flavin containing amine oxidoreductase family
20.2978 Ahg325766 CCCH-type zinc fingerfamily protein with RNA-binding domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression