Detail



ID : Ahg477379

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477379|fgenesh2_kg.3__80__AT3G01440.1
Sequence
ACAAGAACCG GGGCTGGTAC CTAAAGCTTA CTCTCTAGCT AACTACAATG GCTCACTTCT TAGACCTCAA CAGTCTCACC AACACTTCAC CGTTGATTAC GAAACTATCC GAGAATCGTA AAACCGGGAA ATCTGGCGGG TTTGTTTGCA GGAGAAGTGA AGAATTTCAA GAACCGGATT CACTTCATTT CACAAGACGG ATGACATTGG GATTTGCTGT CTCGATAGGT CTAACCGGAA TTTTCGGCGA AAATAATGTT TCCTTGGCAC AAGACAACGG GTTTTGGATC GATGGCCCTC TTCCAATTCC TCCTATTTAC AACAATATCG TGAATGAGAA GACGGGAACA AGAACATTCA TAAAGAAAGG AGTGTATGTA GCGGATATCG GGACGAAAGG AAGAATGTAT AGAGTTAAAA AGAATGCTTT TGATCTGTTG GCAATGGAGG ATTTGATCGG ACCAGATACT TTAAACTATG TTAAAAAGTA CTTGAGGCTT AAATCCACCT TTTTGTTCTA CGATTTTGAC AATCTTATCT CTGCTGCTGC CTCTGAAGAC AAGCAACCTC TCACTGATTT AGCCAACAGG TTGTTCGACA ATTTTGAAAA GCTTGAAGAT GCAGCTAAGA AGAAGAACTT AGCAGGGACA GAATCATGTT ATAAAGATAC AAAGTTTCTT CTTCAAGAGG TAATGACCAG AATGGCATGA ACCTGGTTCG GTTTTCACCG GTTTACTTGC TATTGAAGAT CATTCATGGT TGAGCGAAAA AATGTTGAAA TCTAGTAATA AAAAAAAAAC AATGTAATTA ACGAATTGGA TTTTGATTTT TCAACCAAAG ATAAAGAAAC AAGAGTATAT GC 
Length862
Protein Sequence
Protein Residue
Map Locationscaffold_3: 231770.. 232755
Download Sequence
A.thaliana
AGI-codeAT3G01440.1
DescriptionPsbQ-like 1
TAIR curator summaryEncodes a subunit of the NAD(P)H complex located in the chloroplast thylakoid lumen.
Alias[PnsL3][PQL1][PQL2][Photosynthetic NDH subcomplex L 3][PsbQ-like 1][PsbQ-like 2]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg473938 mitochondrial lipoamide dehydrogenase 1
11.9164 Ahg474076 cytochrome c biogenesis protein family
16.2788 Ahg311357 Polyketide cyclase/dehydrase and lipid transport superfamily protein
19.8494 Ahg490231 photosynthetic electron transfer C
21.7715 Ahg925420 plastid transcriptionally active 4
25.2785 Ahg329483 Pentatricopeptide repeat (PPR) superfamily protein
28.2843 Ahg497434 PsbP-like protein 2
28.2843 Ahg318569 Pentatricopeptide repeat (PPR) superfamily protein
29.2404 Ahg486548 Transketolase
29.2404 Ahg495834
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression