| Annotation |
|---|
| Description | jgi|Araly1|477488|fgenesh2_kg.3__189__AT3G02540.1 |
| Sequence |
ACAAGCCATG TGCTTCGGGG AGATATCGAG GGAACGCAAA GGTAGGGGCC AGATTCTGTA GTACCCTCTT CACCTACCTA CTCTCTTTCT CGAATTTATT TGCCGGCGGC GATCAATCCG AACGGGATTT TAGCCGGAGT AGTCGGTCAC TGGGAAGGGA ATTTGGCCGG TGAGAGAAGA TGAAGATATT TGTGAAAACT CTCAAGGGGA CTCACTTTGA GATCGAAGTA AAACTCGAGG ATTCGGTTGC TGATGTGAAG AAGAACATAG AGACTGTGCA GGGCGCAGAT GTATATCCTG CTGCAAAACA GATGCTTATT CACCAAGGTA AAGTTCTTAA AGATGAGACT ACTATTGAGG AAAACAAAGT TGCTGAGAAC AGTTTTATTG TCGTAATGAT GAACAAGAGT AAACCTGCTT CAACTGGAGC ATCTAGTGCA TCTGCTGGCA CAGCGCAGGC CAAGTCGACA CCTCCCTCAA CATCACAGCC TTCAATTTCC CCTCAGACTC CAGCTTCTGT AGCAGCACCA GTGGCACCTG CACCGACACG TGCGCCACCA CCTGCCCCGA CACCTGCACC TGTAGCTGCA ACTGAAACTG TGACTACACC TATACCTGAA CCTGTACCTG CTACTATACC ATCAAGCACT CCTGCACCAG ACTCAGCTCC TGCGGGAAGT CAAGGTGATG TTTACGGACA AGCAGCATCA AATCTAGCCG CTGGAAGTAA TTTAGAGAGT ACCATTCAGC AGATTCTTGA CATGGGTGGA GGAACCTGGG ATCGTGACAC TGTTGTCCGT GCACTTCGTG CTGCATTTAA CAACCCCGAA AGAGCTGTGG AATATCTTTA TACTGGGATC CCTGAGCAAG CTGAAGTTCC ACCAGTTGCC CGTGCTCCAG CTAGTGTCGG ACAGCCTGCA AATCCTCCAG CACAGACTCA ACAACCTGCA GCAGCACCCG CAAGTGGTCC TAATGCAAAT CCGCTAGACC TCTTCCCACA GGGCTTGCCA AATGTTGGAG GAAATCCTGG TGCTGGAACA CTTGACTTCT TGCGCAACAG CCAACAGTTC CAAGCTCTGC GAGCAATGGT GCAAGCAAAC CCTCAAGTTC TGCAGCCCAT GCTTCAGGAA CTGGGAAAGC AGAACCCAAA CTTGATGCGG TTGATTCAAG ACCACCAAGC TGACTTCTTA CGCTTAATCA ATGAACCCGT TGAAGGAGGG GGAGAAAGTG GCAACCTCCT TGGCCAAATG GCGGCGGGAA TGCCACAGCC ACAGGCGATT CAAGTCACAC CTGAGGAACG CGAAGCAATT GAACGGCTTG AAGCGATGGG ATTTGACAGA GCATTGGTGT TGGAAGTGTT CTTTGCGTGC AACAAGAATG AAGAGTTGGC TGCAAACTAT CTTCTAGATC ACATGCATGA GTTCGAGGAA TAACCTTCTT CAGTTTACTT TACCTACTCT CTATCTTTCC CATTGGTCCA TATGTGTTAC CTATATATTT GTGGGTGCCA AGTCCATGAT CTCGTCACTT TGTCCATGTT CATGGCTCAG TTCTCGGTTT AAAATGGAGT TTATCATCTG CTCTTTCTTT GTATTGTCGT TAGTCCTTAC AAAATCTCCC GTTCCAGTTA TTTTTGTCAA ATTGGGGACA TATGTGCCTA AATAGTAAAA |
| Length | 1670 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 616572.. 620078 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G02540.1 |
| Description | Rad23 UV excision repair protein family |
| TAIR curator summary | Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. |
| Alias | [RAD23-3][RAD23C][PUTATIVE DNA REPAIR PROTEIN RAD23-3][RADIATION SENSITIVE23C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg473197 | glycyl-tRNA synthetase / glycine--tRNA ligase |
| 3.4641 |
Ahg488313 | Protein kinase superfamily protein |
| 7.48331 |
Ahg358984 | NSP (nuclear shuttle protein)-interacting GTPase |
| 7.74597 |
Ahg482274 | MOS4-associated complex 3B |
| 12.3288 |
Ahg921765 | nuclear transport factor 2A |
| 19.3907 |
Ahg933625 | SHAGGY-related protein kinase dZeta |
| 20.199 |
Ahg919131 | MOS4-associated complex 3A |
| 24.1039 |
Ahg899203 | Class II aaRS and biotin synthetases superfamily protein |
| 24.3311 |
Ahg489136 | magnesium (Mg) transporter 10 |
| 27.6586 |
Ahg928358 | pigment defective 320 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|