Detail



ID : Ahg477518

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477518|fgenesh2_kg.3__219__AT3G02760.1
Sequence
ATGCATTCAT TGAAGCAAAT CAAGCAATGG GTGGAGCAAA TCGTAAATCT TATCAATCCT GAGGGTCGTG GTTTTGATAG CTTCTTGGAT AAAGTGAAAG AGATTGTAGA AAGTAATGAA AACAGGAGAC TTCCCAAGCT TCCAAAGGGA ACTCGAGATT TTGCTAAAGA ACAAATGGCA GTCCGAGAAA AAGCCTTTTC AATCATACAA AACGTTTTCA AGAGGCATGG TGCAACTGCA CTTGATACTC CTGTTTTTGA ATTGAGAGAG ACCCTTATGG GAAAGTACGG AGAAGACTCA AAATTGGTTT ATGATATTGC TGATCAGGGT GGAGAGCTTT GCTCTTTACG ATATGATTTA ACTGTTCCAT TTGCACGGTA TGTGGCGATG AATGGAATCA CATCATTCAA AAGATACCAA ATAGCAAAGG TGTACAGAAG GGATAATCCA TCCAAAGGGA GATACAGAGA GTTTTATCAG TGTGATTTTG ATATCGCTGG TTTGTTCGAA CCAATGGGAC CCGATTTTGA AATTGTCAAG ATATTAACTG AACTCCTCGA TGAATTGGAG ATTGGAGATT ATGAGGTGAA ACTGAATCAC CGCAAGTTGC TTGATGGAAT GCTGGAGATA TGTGGAGTAC CACCTGAGAA ATTCAGAACC ATCTGTTCGA GTATCGACAA GTTAGACAAG CAATCGTTTG AGCAAGTGAA GAAAGAAATG GTGGAGGAGA AGGGCTTGTC TTCAGAGATT GCAGACAGAA TTGGCAACTT TGTTAAGGAG AAGGGAGCTC CTTTGGAGCT ATTGTCTAAA CTGAGACAAG AAGGGAGTGA GTTCTTAGAT AACCAGTCAT CAAGAGAAGC TCTGGATGAG TTGAGTATCA TGTTTGAAGC TCTTGAAAGA TCAAAGTGCA GTCACAGAAT AGTCTTTGAT CTAAGTCTAG CTAGAGGTCT TGATTACTAC ACGGGCGTCA TCTTTGAAGC TGTTTGTATA GGAGCAGAGG TGGGATCAAT TGGTGCTGGT GGGCGATACG ATAACCTTAT AGGAATGTTT GGAACAAAGC AAGTCCCTGC GGTTGGGATG AGCCTGGGAA TCGAGAGAGT GTTTAACATA ATGGAAGAGC TTAACGAGAA ACAGAAACAA GTGATTCGAC CAACGGAGAC ACAGGTTTTG GTTAGTATAA TGGTGGATAA TAAACTAGCG GAAGCAGCAG AACTGGTTAG TCGGTTATGG GATGCTAAGA TCAACGCAGA GTATCTTGTG AGCAAGAGGA AAGAAAAGCA TTTCAATCGA GCAAAGGAAT CAGGGATTCC CTGGATGGTG ATGGTAGGAG AAAAGGAACT CAGTGGAGGT TTTGTGACAT TGAAGAAGCT CGAGAAGGGA AGTGAAGAGA AAGAAGATCA AACATGTTCT AGAGATAGTT TCGTGGGAGA ATTGTTGAAA CTACTGAGTT GTTGAAAAGA GATGAAAGGT ACACACTCAC TCCCTGGTCC GATGCCCAGA AAAAAGGAAT CATACTGTGT TTTGCATTTT TTTTGTTTGA TATTGGTGTT TTGAAT 
Length1556
Protein Sequence
Protein Residue
Map Locationscaffold_3: 684073.. 686079
Download Sequence
A.thaliana
AGI-codeAT3G02760.1
DescriptionClass II aaRS and biotin synthetases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg481315 RNA recognition motif and CCHC-type zinc finger domains containing protein
7.07107 Ahg354567 calcium-dependent protein kinase 15
8.24621 Ahg485957 phragmoplastin interacting protein 1
14.4914 Ahg927067 eukaryotic translation initiation factor 2 (eIF-2) family protein
28.6182 Ahg482047 Protein of unknown function, DUF647
31.4643 Ahg950538 myb-like HTH transcriptional regulator family protein
31.7017 Ahg479051 NUP50 (Nucleoporin 50 kDa) protein
32.3265 Ahg478618 nudix hydrolase homolog 16
34.0441 Ahg927732 Pentatricopeptide repeat (PPR) superfamily protein
39.6485 Ahg928085 NOP56-like pre RNA processing ribonucleoprotein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression