Detail



ID : Ahg927067

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927067|scaffold_202628.1
Sequence
GTAGGAAGTA TTCGGAACCA ATGGGTCGGA GGAAGCCGAG TAGTTCTCGA GGTGGAGATG ATGAGCAACC ACCTCTCGTT GGTGCTAAAT CTAATAAGAA AGCTGTTCAA ATTGATGATG ATGATGATGG TGAGTACTCC ATAAAAACTG AGGAGCCTAG AGTTGAGGAA GAGAAAGTTG TTATCACTGG GAAGAAGAAG AGTATTAAGA AGGGTACGCA GCAGCAGGAG GAGGACGATG ATTTTGCTGA GGTTGTTCCC GAGAATGCTT TTGTAGGGAA GAAGAAATCG AAAGGTAAGA ACGGAGGTGG CTCTGTTAGC TTTGCCCTGC TTGCTGATAA GGAGGAAGAG GATGATAATG AATCTGATGG TGATAAAGAT GATGAGCCAG TTATAGGTTT TACGGGTAAG AACCCTGCAT CTAACAAGGG TAAAAAAGGC TTTGCGGTTT CAGCTTTTGA TGCCCTTGGT GGTGATAAGG ATGAAGAGAA AGTGGATGGT GATGAGGAAG AAGTGTCTCC TATCACCTTC TCTGGTAAGA AAAAGAAGTC ATCTAAGTCT TCGAAGAAGA ACACTAATAA AGTTGCTTTG CTTGATGAGG AAGAAGGGAC AGATGCTTCG ACCTCTAGAC TTGGCAAAAA TACAATGGGA GATGAAGAGA GCCTCGAAAT CACGTTTTCT GGTAAAAAGA AGGGCAGCAG TGTTTTGGCC TCAGTAGTTG ATGACTCAGT TGCCTACGAA ACTAGTCAAG CTAAAACTTC TGATACTAAG AGTGTGGAGG TTGTAGAAAC TGCAAAGAGT AAGAAAAATA AGAAGAAGAA TAAGAGTGGA AGGACAGCAC AGGAAGAGGA TGATTTGGAC AAACTTCTTG CAGAACTTGG AGAAACCCCT GCTGCTGCAA GACCTGCTTC ATCGACGCCT GGAGAGGAGA AGGTTCAAGC TCATCCTGGG CCAGTTGCAC CTGTAGAGAA TGCGGGTGAG AAGGAAGGAG AAGAAGAGAC TGTTAAGACT GCTGCAGCGA AGAAAAAGAA AAAGAAGAAG GAGAAAGAGA AGGAAAAAAA AGCAGCAGCT GCTGCAGCAA CCTCTTCTGT AGAGGCTAAG GAGGGAAAAC AAGAAGAATC AGTAACTGAG CCACTACAGG AGAAGAAGAA GGATGCAAAG GGTAAAGCAG CAGAGAAGAA AATTCCTAAA CATGTTAGAG AGATGCAAGA GGCTCTTGCA CGGCGGCAAG AAGCCGAAGA GAGAAAAAAG AAGGAAGAAG AAGAAAAATT GAGGAAGGAG GAAGAGGAGC GCCGCAGGCA GGAAGAGCTT GAGGCTCAAG CTGAGGAGGC TAAGCGTAAG AGAAAGGAAA AAGAAAAGGA GAAACTGTTG AGGAAGAAGC AAGAGGGCAA GCTTCTAACA GCAAAGCAAA AGAGTGAAGC TCTAAAGAGG GAGGCTTTTA AGAACCAGCT GCTGGCTGCT GGTGGAGGTC TTCCTGTTGC AGATAATGAT GGTGATGCTA CTTCCTCAAA GCGTCCCATT TATGCCAACA AGAAAAAATC TGCTCACCAG AAAGGCATTG ACACTTATGT TCAGAGGGAA GATGAGGTAG AGCCAAAAGA GAATCACGCA GGTGAACCAG ATACTTTAGG TGAAGTGGGT TTAACAGACA CTGGAAAGGT TGATTTAATA GAGTCAGCAA ACACAGACGA GAAATCAGAA CCTGCTGATG TTGCTCAGGA GAATGGGATT GAGGAAGATG ATGAATGGGA TGCAAAAAGC TGGGATACTG TTGATCTTAA CCTCAAAGGT GAATTTGATG ACGAAGAGGA AGAACCTCAG CCTGTGGTTA AGAAAGAATT AAAAGATGCT GTATCAAAGG CACATGATTC AGGTATGAGC AAGCCAAGAA CAGCTGTCGT AAAAGCTATG TCTGAAGTGG AACATGCTAC GCCGACAAAA CGTGCTAAGA AGGGTAAAGG CTTAGCTCCA AGTGAATTTA TAGAAGAAGG TGGAGAAAAT CTCCGTTCTA TTATTTGCTG TATCATGGGT CATGTTGATA CTGGTAAAAC AAAGCTGTTG GATTGCATCA GAGGAACAAA TGTACAGGAA GGTGAGGCTG GAGGTATTAC TCAGCAGATT GGTGCAACAT ATTTCCCTGC GGAAAACATC CGAGAGAGGA CCAGGGAACT GAAAGCCGAT GCAAAAATTA AGGTGCCAGG TCTATTAGTT ATCGATACAC CTGGCCATGA GTCCTTCACG AATCTGCGGT CAAGAGGTTC AAGTTTGTGT GACCTTGCAA TTTTGGTGGT TGACATAATG CATGGGTTAG AGCCACAAAC CATAGAATCT CTAAATCTTT TGAGAATGAG GAATACAGAG TTCATTGTTG CATTGAATAA GGTGGATTTA CTCTATGGAT GGAAAACATG CAAGAATGCT CCTATCGTGA AGGCAATGAA GCAGCAAACT AAAGATGTTA CTAATGAATT TAACTTGAGG CTGACCCGGA TTATTACCCA ATTCAAGGAG CAAGGACTTA ACACCGAGCT TTACTACAAG AATAAAGAAA TGGGCGAAAC TTTCAGTCTT GTTCCTACTA GTGCTAAAAG CGGGGAAGGG ATCCCAGATC TCTTGCTGTT GTTGGTTCAA TGGGCTCAGA AAACAATGGT TGAGAAACTT ACTTATGTTG ACAAAGTGAA GTGTACTGTC CTTGAGGTCA AAGTTATTGA AGGCCATGGT ACAACGATTG ATGTTGTGTT GGTAAACGGT GAACTCCATG AAGGTGATCA AATCGTCGTT TGTGGGTTAC AGGGACCTAT TGTCACAACG ATTAGAGCAT TACTGACTCC TCATCCAATG AAGGAGTTAC GGGTGAAGGG TACTTATCTG CATTACAAAG AAATAAAGGC TGCACAGGGC ATCAAAATTA CCGCCCAGGG CCTTGAACAC GCAATTGCTG GTACTTCCCT GCATGTGGTT GGACCTGATG ATGACATCGA GGCAATTAAG GAGTCGGCTA TGGAAGATAT GGAATCAGTT TTGAGCAGGA TTGACAATAG TGGTGAAGGA GTTTATGTAC AAGCGTCTAC ATTAGGGTCA TTAGAAGCAT TGCTTGAATT CTTGAAGTCC CCAGCTGTAA ATATACCTGT CAGTGGTATT GGCATAGGGC CTGTGCATAA GAAGGATATA ATGAAGGCTG GAGTGATGCT CGAGAAGAAA AAGGAATATG CTACAATTTT GGCTTTTGAC GTGAAAGTGA CTACAGAGGC TCGTGAACTT GCAGACGAAA TGGGAGTAAA AATCTTCTGC GCTGATATCA TCTATCATTT ATTCGACCTG TTTAAGGCTT ACATTGAGAA TATCAAAGAG GAGAAAAAGA AGGAATCAGC CGGTGAGGCA GTCTTCCCAT GTGTCCTTCA GATTTTACCT AACTGTGTGT TCAATAAGAG AGACCCAATA ATCCTTGGAG TTAAGGTCCA CGACGGTATA CTTAAGATTG GAACCCCCAT TTGCGTCCCG GGCAGAGAGT TCATCGATAT TGGCCGCATT GCCTCTATCG AGAACAACCA CAAGCCTGTG GATTATGCAA AGAAGGGCGA GGAGGTGGCG ATTAAGATTG TTGCTTCAAA TCGTGAAGAA CAGAAGATGT TTGGAAGGCA CTTTGACATG GAAGATGAGC TTGTGAGTCA CATTTCGAGG AGATCCATCG TCATACTCAA AGCTGACTAC ATGAAAGAAA TGTCGACAGA GAAATGGAAG CTCCTTGTGA AACTGAAGAG AATCTTCAAG ATTCCCTGAA CAGTCAAATG TCTACGCTA 
Length3799
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16309393.. 16314262
Download Sequence
A.thaliana
AGI-codeAT1G76720.1
Descriptioneukaryotic translation initiation factor 2 (eIF-2) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4 Ahg491484 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
6.85565 Ahg488536 SART-1 family
9.38083 Ahg489223
10.247 Ahg473006 Pre-mRNA-splicing factor 3
10.2956 Ahg471712 protein-protein interaction regulator family protein
10.9545 Ahg487145 Family of unknown function (DUF662)
11.1355 Ahg473467 RING/FYVE/PHD zinc finger superfamily protein
12.1244 Ahg476259 Vps52 / Sac2 family
12.5698 Ahg944752 Protein of unknown function (DUF2012)
12.8452 Ahg489000 eukaryotic translation initiation factor 2 beta subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression