Detail



ID : Ahg478926

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478926|fgenesh2_kg.3__1627__AT3G15000.1
Sequence
TTTACACACT CTCGGCTAGG GTTTTGTCTG CGAAACCCAA TCTAGAGCTT CCATGGCGAC GCATACCATT TCTCGCTCCA TTCTTTGCCG ACCGGCGAAA TCTCTTTCCC TTCTGTTCAC GCGATCTTTT GCTTCATCTG CTCCTCTCGT CAAAATTCCG GCGTCGTCTC TGCTCAGCCG TTCCCGTCCT CTCGTCGCCG CTTTTTCCTC CGTTTTCCGT GGCGGCCTTG TGTCTGTTAA AGGTCTCTCA ACGCAGGCTA CGTCGTCTTC TCTGAACGAT CCGAACCCCA ACTGGTCGAA CAGGCCACCT AAGGAGACGA TCCTGCTCGA TGGATGCGAT TTCGAGCACT GGCTTGTCGT CGTGAATCCA CCGGAGGGTG ATCCTACTAG AGACGATATC ATTGATAGTT ACATCAAAAC CCTAGCTCAG ATTGTTGGCA GTGAAGACGA AGCTAGGATG AAGATCTACT CGGTTTCAAC TAGGTGCTAC TATGCTTTTG GAGCCCTTGT GTCAGAAGAT CTTTCTCACA AGTTAAAAGA GTTGCCAAAT GTGCGCTGGG TTCTTCCTGA CTCTTACCTG GATGTGAGGA ACAAAGACTA CGGAGGGGAA CCTTTCATCG ATGGCAAGGC TGTTCCTTAT GATCCCAAGT ACCATGAGGA GTGGATAAGG AACAATGCTA GAGCAAATGA AAGAAACAGA CGCAATGATC GTCCTCGCAA CTTTGATAGA ACCAGAAACT TTGAGAGGAG AAGAGAGAAC ATGGCAGGAG GCCCTCCTCC TCAACGTCCT CCAATGGGAG GTCCTCCTCC TCCTCCGCAC ATGGGTGGCT CTGCTCCTCC TCCGCCTCAC ATGGGTGGCT CTGCACCTCC TCCACCTCAC ATGGGGCAGA ACTACGGGGG ACCACCACCA CCAAACAACA TGGGAGGACA AAGGCCGCCA CCTAACTATG GAGGACCACC GCAAAACAAC ATGGGAGGAC AGAGGCCACC ACCAAACTAT GGAGGAGCAC CACCTCCGAA CTACGGAGGA GCACCACCAG CAAACAACAT GGGAGGAGGA CCACCACCTA ACTATGGAGG AGCACCACCA CCAAACTATG GAGGAGGACC ACCACCTAAC TACGGAGGAG CACCCCCACA GAACAACAAC TACCAGCAGC AGAGTGGTGG AATGCAGCAG CCACAGTACC AGAACAATTA CCCACCTAAC CGGGATGGCA GCGGGAACCC CTACCAGGGT TAAAGTAGTT GAAGCAGTCG TGGGTTTCCT TTTCAATCAT GCATTCTGGG CTGTGTATAG ATAATTTGAG GAAGAGAGAG TGCAATAGCA AGACTTAAAA ACTCCTTTTT ATCTCGAGTG TTTATCAGTC TGGTATTATG TGAGAGAGAG AATAGCCTGA GTAACTCTGG CATGGTTAGA ACTTTTTATG CTTGCGTTTC GTTTTATTAG TTTATATCCT AAATCGATCT CAAGTTCTTC CTTGTGATG 
Length1489
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5935022.. 5937158
Download Sequence
A.thaliana
AGI-codeAT3G15000.1
Descriptioncobalt ion binding
TAIR curator summary
Alias[MORF8][RIP1][multiple organellar RNA editing factor 8][RNA-editing factor interacting protein 1]
Gene coexpression
MR
MR Locus Description
3 Ahg941643 TCP-1/cpn60 chaperonin family protein
3 Ahg311847 GTP binding Elongation factor Tu family protein
8 Ahg474037 nucleolin like 1
8.12404 Ahg493528 glycine-rich RNA-binding protein 2
8.48528 Ahg492871
9.74679 Ahg489610 NOP56-like pre RNA processing ribonucleoprotein
10.247 Ahg493903 prohibitin 3
10.3923 Ahg478388 Transducin/WD40 repeat-like superfamily protein
11.0905 Ahg477651 TCP-1/cpn60 chaperonin family protein
11.225 Ahg496396 DEAD box RNA helicase (PRH75)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression