Detail



ID : Ahg477747

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477747|fgenesh2_kg.3__448__AT3G04780.1
Sequence
GGAGAGTCTA ATTATTTTCT TCCACTTTCT CGATCTTTGA GATTTCTTTC AAAGGAAGAA AAAAAAAAAA AAACTCACGA TGTCCGCCGA ATCAGCTAGC CAAATTCCTA AGGGACAGGT TGATCTACTA GATTTTATTG ACTGGTCTGG TGTTGAATGC CTTAACCAAA GCTCAAGTCA CTCTTTGCCC AATGCTCTCA AGCAGGGATA TAGAGAAGAT GAAGGTTTAA ACTTAGAGAG TGATGCTGAT GAACAACTTC TGATCTATAT TCCTTTTAAC CAAGTTATCA AATTACATTC TTTTGCTATC AAAGGCCCTG AAGAGGAAGG TCCTAAAACT GTAAAGTTTT TCTCAAACAA AGAGCACATG TGCTTCAGCA ATGTCAATGA TTTTCCTCCT AGCGACACCG CTGAACTAAC TGAAGAAAAC CTCAAGGGAA AACCGGTGGT CCTTAAATAC GTCAAGTTTC AGAATGTTCG TAGCTTGACG ATCTTCATCG AAGACAACCA ATCAGGTTCT GAGGTCACCA AGGTTCGGAA GATTGCTCTC TATGGCTCAA CGGTGGAGAC TACTGATATG AAGGGATTGA AAAAGATTGA AGATCACTGA GCAAACAAAA GTGTTTTAAA CATATGATCA TATATCACTT TGATTTCTGG TGTTCTATCG CGCTTTATCG TTCGTTTTTC ACTGACTTTT TAAAGTTATT GGATTAAAAT AGACCTGAAC TTGTGCTTGC C 
Length741
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1584511.. 1586376
Download Sequence
A.thaliana
AGI-codeAT3G04780.1
DescriptionProtein of unknown function (DUF1000)
TAIR curator summaryEncodes a protein with little sequence identity with any other protein of known structure or function. Part of this protein shows a 42% sequence identity with the C-terminal domain of the 32-kD human thioredoxin-like protein.
Alias
Gene coexpression
MR
MR Locus Description
8.66025 Ahg473075
16.6132 Ahg496835
20.7846 Ahg932607 membrane-associated progesterone binding protein 2
25.2785 Ahg950246 Uncharacterised protein family (UPF0172)
26.3249 Ahg485198 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
27.3496 Ahg474089 SWIB complex BAF60b domain-containing protein
27.7489 Ahg333551 dicer-like 1
29.0689 Ahg934063 geranyl diphosphate synthase 1
29.3939 Ahg475923 phosphatidylinositol synthase 1
38.7298 Ahg487239 HhH-GPD base excision DNA repair family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression