Detail



ID : Ahg950246

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950246|scaffold_802133.1
Sequence
GTGAGTCGCC GATCGAGTTA GAGATGGGGA TGGGAAGTAA CGGCGAATTG AAGTATGAGA TCTCCCAGAA CGCGTACATC AAACTCGTTC TCCACTCGCT GCGACACAAG ACGGCGGCGG TCAACGGAGT CCTCGTCGGT AGAATCAGCC CTAAGGACGA CGGAGTTGTA GAGATCTCAG ATTCTGTGCC GCTCTTTCAC TCTAACCTTG CTCTCCTCCC TCCTCTCGAG ATCTCCCTCA TCATGATAGA GGAGCATTAT GTGGCTCAAG GTTTAAGTAT TGTTGGATAC TTTCACGCAA ACGAGAGGTT TGATGACGTT GAGCTCTGTG GTGTGGCTAA GAACATTGGC GATCACATCT CTCGCTATTT CCCTCAAGCA CCAATTCTCT TGTTGAACAA CAAAAAGCTT GAAGCCTTAT CAAAGGGTAA AGAGCGTAGC CCTGTGATGC AGCTCTGTGT GAAGGATGCT TCTAAGAACT GGAGAGTGGT TGGAGCAGAT GGAGGAAGCA AGCTACTGTT AAAAGAGCCA TCGGCCAATG TAATTTTGTC AGATTACATT TCATCTGAGA AATGGAAGGA CGTCACAGAT GTTGATGATC ACCTTGATGA TGTTACCAAG GACTGGCTAA ACCCTGGACT TTTCAACTGA AGATGTGTAT GCGATATAGC TAAATTAGAC TTTTGCTTTC ATCATCGTCA GTCTAAAAAC AAAAAATTCT CGGAGACCCT TGTTTAAAAT TTCCCTTGAA TCTTGTTAAA GTATTATCCA GCTACACAGC AGAGCTCAAA TCACTTTTAA TTGGTACACA TCTTAAACCT TAGTTTTATC ATTTGAATGA TATCTCTTG 
Length849
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16197757.. 16199617
Download Sequence
A.thaliana
AGI-codeAT5G55940.1
DescriptionUncharacterised protein family (UPF0172)
TAIR curator summary
Alias[emb2731][embryo defective 2731]
Gene coexpression
MR
MR Locus Description
11.7047 Ahg930399 heteroglycan glucosidase 1
14.6629 Ahg472334 U5 small nuclear ribonucleoprotein helicase, putative
14.8661 Ahg478846 20S proteasome alpha subunit E2
17.3205 Ahg923241 Signal recognition particle, SRP54 subunit protein
17.3205 Ahg923242 Signal recognition particle, SRP54 subunit protein
20.445 Ahg951209 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
24.4949 Ahg897921 centrin2
25.2785 Ahg477747 Protein of unknown function (DUF1000)
26.1151 Ahg491904
29.9833 Ahg484577 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression