Detail



ID : Ahg482209

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482209|fgenesh2_kg.4__1269__AT2G32730.1
Sequence
AAAACCACTC TCTTTCAAAC CCAGTAGAGA GATTCAAGAC GGGTCTCATC GAAAGTTCGA ATCTTTCGTC ATCTGATTTG CTTTCTCTTA GGGTTTTTTC AATTTCGATT TAGTGTTCTT CATCAATGGC GACACCCATG GTTAGTTCGG CTGGAGGGTT ACTAGCAATG CTCAACGAGC CTCATCCTGC TTTAAAGCTT CATGCGCTCT CTTATCTCAA CAATTTGGTT GACCAATTCT GGCCTGAGAT CTCCACTAGT GTCCCCATCA TTGAGAGTTT ATATGAAGAT GAAGAATTCG ATCTGCATCA AAGACAGCTT GCTGCTTTGC TGGTCTCTAA GGTTTTCTAT TACTTGGGCG AGCTTAATGA TTCATTGTCT TATGCCCTTG GAGCTGGGCC CTTATTTGAT GTTTCAGAGG ATTCTGATTA TGTTCATACG CTTCTAGCCA AAGCAATAGA TGAATATGCC AGTCTCAGAT CAAAAGCAGT TGAGTCAAAT GAGATGGTGG ACATTGATCC CAGGCTGGAG GCGATTGTTG AAAGAATGCT TGGAAAATGC ATCAGTGATG GGAAGTATCA ACAAGCCATG GGCATTGCGA TAGAATGCCG GAGATTGGAT AAGTTGGAAG AGGCTATCAC TAAGAGCGAT AATGTTCAGG GAACTTTATC ATATTGCATC AATGTTTCTC ATTCCTTTGT TAACCGCAGA GAGTATAGAC ATGAGGTGCT TAGTTTACTT GTTAAAGTCT ACCAGAAGCT GCCTTCTCCT GATTATTTGA GCATTTGTCA ATGCCTCATG TTTTTGGATG AACCGCAAGG TGTTGCAAGC ATTTTGGAGA AGCTTCTTCG CTCGGAGAGC AAGGATGATG CTTTATTGGC GTTGCAAATT GCATTTGATC TTGTAGAGAA CGAGCACCAG GCCTTTCTCT TGAGTGTTAG AGATCGCCTT CCAGCTCCCA AAACACGTCC TGTAGAAGCA ACTCAGGCTG TTGAAACTAC TACTGCTCCG AATGAGAACC CTTCGGGGGA TGTCCAGATG GCGGATGAAA CTCCAGCTCA GACAATTGTG CACGAGACAG ATCCAGTTGA TGCTACATAT GCTGAGAGGT TGACAAAGAT TAAGGGAATT TTATCTGGAG AGACATCTAT TCAGCTGACA CTTCAATTTC TTTACAGCCA CAACAAATCG GACCTGCTGA TACTGAAGAC AATCAAACAG TCTGTAGAGA TGCGGAACAG TGTATGCCAC AGTGCTACAA TATATGCTAA TGCCATTATG CATGCTGGAA CTACAGTGGA CACTTTCCTT AGAGAGAATT TGGATTGGTT AAGCAGGGCA ACCAATTGGG CTAAGTTTAG TGCTACAGCG GGATTAGGTG TTATTCACAG AGGTCATCTG CAACAGGGTA GGTCATTGAT GGCTCCATAC TTGCCTCAGG GAGGAGCAGG TGGTGGTGGG AGTCCTTATT CCGAAGGAGG TGCTTTATAT GCCCTTGGCC TTATTCATGC TAACCATGGC GAGGGAATCA AGCAATTTCT ACGTGATAGC CTACGCAGCA CTAATGTTGA GGTCATTCAA CATGGAGCTT GCTTAGGTCT TGGCTTGTCA GCTCTCGGGA CAGCTGATGA AGAGATATAT GATGATGTCA AAAGCGTGCT TTATACTGAT AGTGCAGTTG CTGGTGAAGC TGCTGGCATC AGCATGGGTT TATTATTGGT TGGAACTGCT ACTGAAAAGG CAAGTGAGAT GCTTGCTTAT GCTCATGAGA CACAGCATGA GAAGATAATA AGGGGATTGG CTCTAGGAAT AGCTCTTACA GTATACGGTA GAGAAGAAGG AGCAGATACC TTGATTGAGC AGATGACTAG AGATCAGGAT CCTATCATTC GTTATGGTGG CATGTACGCA TTGGCATTGG CTTACAGTGG AACCGCAAAC AACAAGGCAA TTCGACAATT GCTGCACTTT GCTGTATCTG ATGTCAGTGA TGATGTTAGG AGGACTGCTG TTCTGGCACT TGGATTTGTC TTGTACTCTG ATCCAGAGCA GACTCCCCGT ATTGTATCTC TGCTTTCTGA GTCGTACAAT CCACATGTTC GCTATGGTGC GGCTCTTGCA GTGGGTATTT CTTGTGCAGG CACTGGCCTC AGCGAAGCGA TATCCTTGTT GGAGCCACTT ACATCAGATG TTGTTGACTT TGTTCGTCAA GGTGCTTTGA TTGCAATGGC CATGGTGATG GTTCAAATTA GCGAAGCTAG CGATTCTCGT GTTGGAGCAT TTAGGCGCCA ACTTGAGAAG ATTATACTCG ACAAGCACGA AGATACAATG AGCAAGATGG GAGCAATTCT GGCCTCTGGT ATCCTTGATG CTGGTGGTAG GAACGTTACT ATCAGACTAC TCTCTAAGAC CAAACATGAC AAAGTCACTG CTGTTATCGG CCTTGCAGTC TTCAGCCAAT TTTGGTATTG GTACCCACTG ATCTATTTCA TTAGTTTGGC CTTCTCACCA ACCGCTTTCA TCGGTTTGAA TTACGACCTT AAGGTCCCCA AGTTTGAGTT CATGTCACAC GCAAAACCGT CTTTGTTTGA GTACCCAAAA CCCACCACGG TTCCTACAGC CAATACCGCT GTGAAACTTC CAACCGCTGT TCTCTCAACC TCAGTTAAAG CCAAAGCTAG GGCTAAGAAA GAAGCAGAGC AAAAAGCTAT TGCTGAAAAA ACATCTGGTC CTGAAAAACC TGTCAATGAA AGTGGATCTG GAAAAGGAAA AGCATCAACT GAGAAGGAAG GAGACTCTAT GCAGGTCGAT AGCCCAGCAG CGGTCGAGAA GAAAGCTGCT GAGCCAGAGC CAGCATTTGA GATTCTAGTG AACCCAGCTC GAGTAGTCCC AGCTCAAGAG AAATACATAA AGTTACTTGA AGACAGCAGA TATGTACCAG TGAAGCTAGC TCCGTCAGGT TTCGTTCTTC TCAAAGACTT GCGTCAACAC GAGCCAGAGG TTCTCTCTCT GACCGATGCC CCAACTTCAA CAGCTTCTCC TGCAACTGGT GCAGCGGCAC AAGGAACCAC AGCCTCGGCT ATGGCCGTAG ATGATGAGCC ACAACCTCCA CAAGCCTTTG AATACGCTTC ATGATTTTAT TTTCTTTTAA AATTAGTGGG AATTTGTTGT TGGTTTTATT GGTTTCTGTT GAAAGACAAA AAGCAAAGAA AAACAGATCT TTGAACTTTG AGATACTGCT TCTTGTCATT TGCAACTGGT TTCAAGTTCA ATTACGATCT TTGTGTTAGG TACTTTTCTT TT 
Length3302
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14703940.. 14709678
Download Sequence
A.thaliana
AGI-codeAT2G32730.1
Description26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg928358 pigment defective 320
3.60555 Ahg478516 lysyl-tRNA synthetase 1
5.09902 Ahg929571 lipoamide dehydrogenase 2
7 Ahg947537 crooked neck protein, putative / cell cycle protein, putative
13.0384 Ahg470757 CCCH-type zinc fingerfamily protein with RNA-binding domain
14.8324 Ahg951951 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
15.748 Ahg945524 detoxifying efflux carrier 35
17.7482 Ahg490589 Transmembrane amino acid transporter family protein
18.735 Ahg951457 Tetratricopeptide repeat (TPR)-like superfamily protein
18.7617 Ahg470837 GTP binding Elongation factor Tu family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression