| Annotation |
|---|
| Description | jgi|Araly1|478548|fgenesh2_kg.3__1249__AT3G11964.1 |
| Sequence |
ATGGTAGTAC CGCAGAAGAA ATTTGCTAAT GGAAAACGTC ATGATTCTAC AAAGTCCTTT AAACCAACGA AGAAACCGTT TAAGAAGACC AAGGACGATG TAGCTGCTAG GTCTGAAGCC ATGGCTCTTC AGCTCGACGA TGTTCTTGAC TTTCCTCGAG GTGGAGGGAC TTCTCTGAGT AAAAAAGAGC GTGAGAAAAT TTATGAAGAA GTCGATGCTG AGTTTGACGC TGATGAGCGT GTTTCTAAGA AGAGTAAAGG AGGAAAGTCT AAAAAGAGAA TCCCTAGCGA TGTAGACGAA TTGGGATTGC TTTTTGGCGG CCTTAATGGA AAACGGCCAA GATATGCCAA TAAGATTACC ACTAAGAATA TCTCCCCAGG AATGAAGCTT TTGGGAGTTG TTATTGAAGT AAACCAGAAG GATATTGTAA TTAGTCTTCC AGGGGGATTA CGTGGATTAG TTCGCGCAAG CGAGGCATCA GATTTTACTG ATCTTGGGAT TGAGGTGTTC TCTGCTAACG TGAAAAGCGT TGAAGACCAT GGTTATATCC TTCATTTTGG ATTACCTTCT ATCTCAGGAT TCATCGAAAT AAGCAACGAT GGAAACCAGG AGTCAGTAAT GAAGACTGGG CAGCTTATTC AGGGCGTGGT TACAAAGATC GATAGAGATC GTAAAGTTGT TCATCTTAGT TCTGACCCAG ATTCAGTGGC TAAGTGTCTG ACCAAGGATC TTAATGGCAT GTCGTTTGAT CTTCTCATCC CAGGCATGAT GGTTAATACT CGCGTGCAAT CAGTCCTTGA GAATGGGATA CTGTTTGATT TTCTTACATA CTTTAATGGA ACAGTTGATC TCTTCCACCT AAAAAATCCA TTGTCTAACA AAAGCTGGAA GGATGAGTAT AATCAGAATA AGATGGTTAA TGCTAGAATA TTGTTTATCG ATCCATCATC TAGAGCTGTT GGTTTGACAT TGAACCCTCA TCTTGTTTGT AACAAGGCTC CTCCGTTGCA TGTCTTTAGT GGAGACATAT TCGATGAAGC AAAAGTAGTT CGTATTGATA AATCAGGCCT TCTTCTGGAA CTTCCTTCTA AGCCCGTACC AAATCCAGCA TACATCAGCT TTAAGGAAGG AAATCACATC CGTGTTCGAA TACTTGGCCT TAAGCAGATG GAAGGGTTGG CCATAGGGAC TTTAAAGGAA AGCGCCTTTG AAGGTCCAGT TTTCACCCAC TCTGATGTCA GACCTGGTAT GGTGACAAAG GCAAAAGTCA TATCTGTTGA TACATTTGGT GCCATTGTCC AATTTGCGGG TGGTCTCAAA GCAATGTGCC CACTTCGGCA TATGTCTGAG TTTGAAGTTG CGAAGCCCAG GAAAAAGTTC AAGGTTGGAG CTGAGTTAGT ATTCCGTGTG CTTGGCTGCA AATCAAAGAG AATAACTGTT ACCTACAAGA AAACACTTGT GAAGTCTAAA CTTCCAATTT TGAGTTCTTA CACTGATGCA ACTGAAGGGC TAGTGACGCA TGGTTGGATA ACAAAGATTG AAAAGCATGG ATGCTTTGTT CGCTTCTATA ATGGAGTGCA AGGATTTGTT CCCAGATTTG AACTTGGTTT AGAGCCTGGA GGTGATCCAG ATTCAGTGTT TCATGTTGGG GAGGTTGTCA AATGTAGAGT AACCAGTGCA GTTCATGGTT CTCGAAGGAT CACCCTTAAC GATTCAATCA AGTTAGGTAG CATTGTATCA GGGATAATTG ATAGTATAAC TAGTCAGGCA GTCATTGTCC GTGTTAAATC TAAAGGTGTT CTCAAGGGTA CAATTTCTGC TGAACATTTA GCTGATCATC ATGAGCAAGC AAAAGTAATA ATGTCACTTT TAAGACCTGG ATATGAGCTT GATAAGCTGC TGGTACTAGA CATTGAAGGC AACAACTTGG CTCTCTCTTC AAAATATTCT CTCATTAAGT TAGCTGAAGA GCTTCCTTCG GATTTTAATC AGCTCCAGCC AAACTCAGTG GTTCATGGTT ATGTTTGTAA CTTGATTGAA AATGGCTGCT TTGTCCGTTT TCTTGGTCGG TTGACTGGTT TCGCCCCAAG AAGCAAGGCA ATTGACGACC CCAGGGCAGA TCTGTCAGAA TCCTTCTTTA TTGGACAATC GGTTCGGGCT AATATAGTTG ATGTCAATCA AGAAAAAAGT AGGATAACTC TTTCATTGAA ACAGTCATCT TGCGCATCTG TAGATGCTTC TTTTGTCCAA GAGTACTTCC TCATGGATGA GAAGATATCG GACCTGCAAT CATCTGATTT TACTAAAAGT GAGTGTAGCT GGATTGAGAA ATTCTCAATT GGGAGTTTGA TCAAGGGAAC CATACAGGAA CAAAATGATC TGGGTGTGGT GGTGAATTTT GACAATATTA ATAACGTCCT TGGTTTTATA CCTCAGCATC ATATGGGTGG AGCTACTTTG GTACCCGGTT CTGTTGTCAA TGCAGTTGTT CTTGATATTT CTAGGGCAGA GAGACTAGTT GATTTGTCTT TGAGGCCTGA GCTCATGAAC AACTTAACCA AAGAGGTGTC CAACAGTCAG TCGAAAAAGA AACGTAAAAG AGGAATCTCC AAGGAACTTG AAGTCCACCA GAGGGTCAGT GCTGTTGTAG AGATTGTGAA GGAGCAACAC TTGGTTTTGT CGATTCCAGA GCATGGTTAC ACTATAGGAT ATGCATCAAT ATCAGACTAT AACACACAGA AGTTGCCAGT GAAACAATTT TCCACTGGCC AAAGTGTTGT TGCTTCTGTT AAGGCTGTGC AAAACCCTTT AACGTCTGGG AGGTTGCTTT TACTTCTTGA CTCTGTTTCC GGCACTTCTG AGACTTCCCG TTCTAAGAGG GCAAAGAAGA AATCCAGCTG TGAAGTTGGT TCTGTCGTCC ACGCAGAGAT TACTGAAATA AAGCCTTTTG AACTTAGAGT AAACTTTGGC AACAGTTTCC GAGGAAGAAT CCACATAACT GAGGTAAATG ATGCAAGTAC AAGTGATGAA CCTTTTGCCA AATTCAGAGT TGGGCAATCA ATGTCTGCAA GGGTTGTTGC AAAGCCGTGT CATACTGATA TTAAAAAGAC TCAACTTTGG GAGCTTTCTG TAAAGCCGGC AATGCTTAGA GATTCCAGTG AGTTGAATGA CATAAAAGAG AGTGAACAAC TTGAGTTTGT TGCTGGACAA TGTGTCAATG GATATGTCTA CAAAGTGGAT AAGGAATGGG TTTGGTTAGC AATATCTCGC AACGTGACGG CACGCATATT CATTTTAGAC ACTGCATGCG AAGCTCATGA ACTTGAGGAG TTCGAAAGGC GTTTTCCCAT TGGTAAAGCT GTTTCAGGCT ATGTTTTGAC ATACAATAAA GAGAAAAGAA CATTACGGTT GGTTCAGCGT CCACTACTTG ATATCCACAA AAGCATTGCC AACGGTGGAG GCAGCAAAAC AGATAAACTA GACAGTAGCA TTCCTGTTGA TGATGGTACT CTATTTATTC ATGAAGGAGA CATTCTGGGT GGAAGAATTT CTAAGATACT TCCTGGTGTT GGTGGATTTC GTGTGCAAAT AGGTCCTTAT GTATTCGGGA GAGTTCATTT TACTGAAATC AATGATTTAT GGGTACCCAA TCCATTAGAT GGTTTTCGTG AAGGCCAGTT TGTCAAATGC AAGGTCTTAG AAATCAGCAG TTCTAGTAAA GGGACTTGGC AAATTGAACT GTCATTGCGG ACATCACTAG TTGGCATGAG TTCTGCTGAC CATCTCTCAG AAGATTTGAA TAATAATGAC AATGTTTGTA AGCGTTTTGA GAGAATTGAA GATCTTTCTC CTGATATGGG CGTCCAGGGT TATGTAAAAA ATACGATGTC GAAAGGTTGT TTTATTATAC TTTCAAGGAC AGTAGAGGCA AAAGTTAAAC TGTCAAATTT ATGTGATACT TTTGTTAAGG AACCCGAAAA GGAATTTCCA GTAGGAAAAC TTGTAACTGG CAGGGTTTTA AATGTGGAGC CTTTATCCAA GCGGATAGAA GTCACTTTGA AGACAGCAAA TGCTGGTGGG CAGCCAAAAT CTGAATCTTA TGACATGAAG AAATTCCATG TTGGAGATAT GATTTCTGGG AGAATCAAAC GTGTGGAGCC CTATGGCTTA TTCATTGACA TTGATCAAAC TGGCATGGTT GGATTATGTC ACATAACACA GCTTTCGGAT GATCGTATCG AGAATGTACA AGCCAGGTAT AAAGCTGGGG AGAGCGTCAG CGCAAAGATT TTGAAGCTGG ACGAGAAAAA GCGACGTATA TCGCTCGGAA TGAAAAGTTC TTATCTTATG AATGGTGATG ATGTCAAGGC ACAACCACCT TCCCAAGACA ACGCTGATGA AACAAGCATG GAATGTGATC CAATCAATAA TCCGAAGACG GAAGTTCTTG CAGCAGTCGG TGATTTTGGG TTCCAGGAAA CAAGCGGTGG AAGACATAGT GGAACTTCTC TGGTTCTTGC CCAAGTAGAA TCAAGGGCTT CTATCCCTCC GCTTGAGGTT GACCTTGATG ACATTGAGGA GACGGACTTT GACAACAACC AAAATCAGGA GAAACTACTG GGAGCCGATA AAGATGAAAA GAGCAAGAGA AGGGAAAAGC AAAAAGACAA GGAGGAAAGA GAGAAAAAAA TACAAGCTGC TGAAGGAAGA TTGCTGGAGC ATCATGCACC TGAGAGTGCT GATGAGTTTG AGAAATTGGT TAGAAGCTCT CCAAACAGCA GCTTTGTCTG GATAAAATAT ATGGCATTCA TGCTCAGCTT GGCTGATATT GAGAAAGCCA GGTCTATTGC TGAGAGGGCC TTGAGGACTA TAAATATTCG TGAGGAAGAA GAGAAGCTAA ACATATGGGT TGCTTACTTC AATTTGGAAA ATGAACATGG AAGTCCACCA GAGGAAGCGG TTAAGAAAGT GTTTGAAAGG GCCCGTCAAT ACTGTGACCC AAAGAAAGTT TACCTCGCAC TCTTGGGCGT GTACGAGAGA ACAGAGCAAT ATAAATTGGT TGATAAGCTG CTTGATGAGA TGGTTAAAAA GTTCAAGCAA TCTTGCAAGA TTTGGTTAAG GAAAATACAA AGTTCTCTAC AACAAAACGA GGAAGGCATT CAATCCGTTG TGAATCGCGC CTTGCTATGT CTTCCACGCC ATAAGCACAT TAAGTTCATA TCACAGACTG CTATCCTTGA GTTCAAATGT GGAGTTGCCG ATAGAGGGAG ATCACTGTTT GAAGGCGTTC TTAGGGAATA CCCGAAAAGA ACAGATTTGT GGAGTGTTTA TCTTGACCAA GAGATCCGGC TGGGAGAAGT GGATGTAATT AGATCTTTAT TCGAGAGAGC CATTAGCTTG AGCTTGCCTC CCAAGAAGAT GAAGTTCTTG TTCAAGAAGT TCTTGGAATA TGAGAAATCT GTTGGTGAAA AGGAGAGAGC CGAATACGTG AAACAGAGGG CGCTGGAGTA CGCAAAAAGT ACTTTGGCCT GA |
| Length | 5532 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 4556526.. 4568879 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G11964.1 |
| Description | RNA binding;RNA binding |
| TAIR curator summary | |
| Alias | [RRP5][Ribosomal RNA Processing 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg495674 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 4.58258 |
Ahg493213 | DEA(D/H)-box RNA helicase family protein |
| 5 |
Ahg339148 | |
| 6.32456 |
Ahg492297 | FK506 BINDING PROTEIN 53 |
| 6.85565 |
Ahg495739 | TCP-1/cpn60 chaperonin family protein |
| 7.07107 |
Ahg486159 | homologue of NAP57 |
| 8.3666 |
Ahg316209 | CCAAT-binding factor |
| 8.48528 |
Ahg474886 | methyltransferases;copper ion binding |
| 8.66025 |
Ahg490107 | Met-10+ like family protein / kelch repeat-containing protein |
| 9 |
Ahg474417 | Ribosomal RNA processing Brix domain protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|