Detail



ID : Ahg339148

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|339148|fgenesh1_pg.C_scaffold_2001247
Sequence
ATGGGGAAAG ATAACAAAAC GAAGAAGAAG CCTAACAAAA AAGGCGAAAG AAGAATGGGA CCAGATGCAG TCGCCATGAA AGCTAAAACC CAGAAGGTCG ATAATCCATT TGAATCAATC CGCTCTCGCC GAAAGTTCGA TATCCTCGGA AAGAAGCGTA AAGGTGAAGA ACGGTTCGTC AGTGTCTCTC GAACTCGTGC TGTTGATAAG AGGAAGAACA CGCTGCAGAA AGAGTATGAG CAAAGCTTAA AAGCTTCGGT TTTTTTGGAT AAGCGTATTG GAGAACATGA TGATGAGCTT GGTGAGTTCG ATAAGGGTAT AATTCGATCG CAGAGACAGC GTCAGTTGAA ACTAGCGAAG AAGAGTATGT ATAATTTGTC TGATGGGGAA GAGGATGTAT ATGAAGATGG TGCTCTTGGT GGTTCTTCTG TAAGGGATGA TTTTGATTCT GGACTTTTGT CTGATGAAGA TCTTCAAGAT GATGATCAAG AAGCTTCTGC ATTAAAGAGA TTGAAGCATC TAAACAGAAA CAGACAGGTT GACGCATCTG GAGAGGAAGA GAGACATAAG AGCAAGAAGG AAATCATGGA AGAGATCATC ATGAAGAGCA AACTTGGCAG GATGGAGAAA GCTAAGCAAA AGGAGGAAAA GGGAAAGCTA ATGGATGAGC TGGATGAAAA TTTCAAGTCT TTAGTGAATT CTCAGGCGAT GGAGAGTTTA ACTAAGCCTT TTGATGTCGA AGAGGATACA CGCAATCCTT ATGTATTAAT GCTGAATGAT ATGGCAATGG ATATTCGTGC TCGTCCTTCT GAGAGGACAA AGACACCTGA AGAAATTGCC CAGAAAGAGC GAGAAAAGTT AGAGGCTCTT GAGGAAGAGC GTAAGAAAAG GATGCAGGAA ACTGAGGAGT TAAGCGATGG GGATGAGGAA ATTGGCGGTG AGGAATCAAC AAAGAGGCCA AGGGTCATTT CTGGTGATGA TCTTGGTGAT TCCTTCTCAG TTGAAGAAGA TAAGCCGAAA AGGGGATGGA TTGATGATGT TCTTGAAAGA GAGGATGATG TTGATAATTC AGAAAGTGAT GAGAATGATA GCTCTTCTGA GGATTCAGAA AGTGAAGAAG AAGAAGATGA TGAGTCAGAT GGGGGTGATG AGAAGCAGAG AAAACGTCAT CATTTAGAAG ACTGGGAACA AAGTGATGAT GAGCTAGGGG ATGAGCTGGA AGATGAGGAG GAGGATGATG ATGAAGAAGA TGATGAGCCA AGAGTACATA AAAAGTTGAA GAATGACTAT GCTGCTCCAA ATAAAGGAGA AGTGTTGTCT GGAACAGTGA AACAAAAAAA CAATATGAAG AAATTGAGTT CAACGCAGCG TGACATTCCG TTCATGATTG ATCCTCCAAA GAATTTCGAG GAATTGCTTG CCCTAGTGGA AGATTGTTCA AATGAAGATG TTATTTTAAT TGTCAACCGA ATCCGGATAG CACACTCAAT TAAGATTAAA GCTGAAAACC GAAAAAAGAT GCAGGTCTTC TATGGTGTTC TCTTGCAGTA TTTTGCCGTT CTTACAAGCA AAAAGCCCTT GAACTTTGAT TTACTAAATA TGCTTGTCAA ACCTTTGATT GAGATGAGCA TGGAGATCCC CTACTTTGCT GCAATATGTG CTCGCCAGCG GCTTTTAAAG ACCCGTGCAC AATTTTGCGA GGCTATCAAG AATCCAGAGG ATGGATGCTG GCCTTCCTTG AAAACATTGT TTCTCTTGCG GCTCTGGTCC ATGATTTTTC CATGCTCTGA CTTTCGCCAT GCTGTGATGA CCCCATCGAT ATTGTTGATG TGTGAATATC TCATGCGCTG TCCCATCTCT TCTGGTCGTG ATATTGCCAT AGGTTCCTTT TTATGCTCCA TTGTTCTCTT GGTTGCCAAG CAATCTAAAA AGTTCTGTCC TGAAGCCATA TTATTTATTC GGACCCTCCT GATGGCTGCT TCAGACAAAA AGTCACCATC ATCTGCGGAA TCTGAGTTTT ATCATTTCAT GGAATTAAAA TCGTTGACTC CATTGCTGTG CATACAAGAC AACGTAAAGG AGGTCATGCC TTTAAACTTC CTAAAGATAA TGAATGAGCC AGCAGACTCT CCATATTTCA GCTCTGATGA TTTCAGAGCA AGCATCCTTT CAAGTGTAGT TGATACTCTT GGAGGGTTTG TGGAGATAAA CGGAGGATTG AGTTCCTTTC CAGAGATCTT CATGCCCATC TCAACTTTAT TGCACCAAAT TGGGAACCAA GAAAAGATCC CACAAACTCT CAAGGAGAAA TTAGAAGATG TCGCAAAGCT AATCGAAACG AAAACCGATG AGCATCACAA GGAACGCAAA CCACTCTCTA TGCGTAAGCA TAAGCCAGTA GCCATCAAAA TGGTCAATCC CAAATTTGAG GAGAACTTTG CTCCAGGCAG GGATTACGAT CCAGACAAAT ACCGTTCTGA CCTCAAAAAG TTGAAGAGAA AGTTAAAACA GGAAGCCAAA GGAGCAGTGC GTGAGCTGCG CAAAGACAGC TACTTCATGA GCTCGGTTAA AGCGAAAGAG AAAGCTGTGC ATGAGCAAGA GAGAGCAGAG AAACATGGCA AAGCTTGGGC TTTTCTTCAA GAACAAGAAC ATGCTTTCAA ATCTGGACAA CTTGGTAAAG GCAAAGGCAA GAAGAGAAGA CGTTGA 
Length2706
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12750749.. 12754505
Download Sequence
A.thaliana
AGI-codeAT1G69070.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5 Ahg478548 RNA binding;RNA binding
5.19615 Ahg496396 DEAD box RNA helicase (PRH75)
6 Ahg486159 homologue of NAP57
6.16441 Ahg349526 Transducin/WD40 repeat-like superfamily protein
6.48074 Ahg931417 Ribosomal protein L31e family protein
8.83176 Ahg492297 FK506 BINDING PROTEIN 53
9.94987 Ahg474417 Ribosomal RNA processing Brix domain protein
10.4881 Ahg316209 CCAAT-binding factor
10.9545 Ahg928085 NOP56-like pre RNA processing ribonucleoprotein
12.0416 Ahg481300 selenium binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression