Detail



ID : Ahg478582

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478582|fgenesh2_kg.3__1283__AT3G12220.1
Sequence
TAAACAAAGA CTAAAAGATG TTTGTTTGGG TCAACGTCTC TGTTTTTGAA GATAAAAATG TTTAAAAAGA ATGGGTTCAT GGATACCCAA GTTTCTGCTG CTGCAACTTG TGCTTCTGTT GACTAAGCAT GCTGATTCAA GTTCTATCAT CAGATATCTT CCTGGTTTTG AAGGCCCTCT TCCCTTCGAG CTCGAAACCG GGTACATTGG TGTTGGTGAT GAAGAGGAAG ATCAAATGTT CTACTACTTC ATCAAATCTG AGAGCAATCC AGAAGAAGAC CCTCTTCTTG TCTGGTTAAC TGCAGGACCT GGCTGCTCTT CTTTCTCTGG TCTTGTTTAT GAGAATGGGC CTCTTGCTTT CAAGGTTAAG GGTTACAATG GAAGTATTCC CACGTTGGTT TCTACTACAT ATTCATGGAC TAAGGTAACA CCAGCTTTTG GATCATTGCT TCTTTTTAGA AATCCACTTG CTGATATATC AAGTGACACA GGATCAACTA AGCGGGTCGA CGAGTTTCTT CCTAAGCTAA GCATCGAGTA TTTCTCCAAT CCTTTCTACG TCACCGGCAA TTCTTACTCC GGTAAGTTGA TTCCGGTTAT CGTTCAAGAA ATCTCAAATG GAAACTGTAT ATGCTGCAAA CCTCAAATAA ATCTTCAGGG CTATGTGCTC GGAAGCCCGG TTACAGATTC TGAACTTAAT AAAAACTCTC GCATTCAATA TGCTCATAGA ATGTCACTCA TATCTGATGA ACTCTACGAG TCGATGAAGA GAAGCTGTGG AGGAAACTAT ATTATTGTAG ATCCTCTAAA CACACAATGC TTGGAACTCA TTAAAGACTA TGACAAGTGT GTTTCTGGAA TATATGAAAA CCTTATCCTC GCACCAAAAT GTGACCTTAC ATCTCCTGAT TGCCAATTTG CCATGTTGCT ATGGCAGTCG TATCGGTCTA TGCTATCCGA ATACTGGGCC AATAACGAGA GCGGTACTAC AGGTAATGGG GAACGATGTA AATGGAGTTT GCAAAGCAAT AAAGACATTA AAAGCAGCAT ACCATACCAT AAAAAGAACA GCATCGAAGG CTATCGATCT CTCATCTTCA GTGGTGATCA CGACATGCTA ACACCTTACA TTGGAACTCA AGACTGGATC AGATCTCTTA ACTATTCCAT TATTGACAAA TGGAGGCCAT GGATGATACT TGATCAAGTC GCTGGATACA CTACGACTTA TGCTAACAGG ATGACATTTG CAACAGTGAA AGGAGGAGGG CACACGTTAG ACTATAAACC CAAGGAGAAT TCAATCTTGT TCCAGAGGTT GGTGGCACAC GGGCAGGGTA TAAAGCCAGA GGAAAGATCA ATAATGTTCA AGATATGGAT AAGTGGCCAA CTTCTGTAA 
Length1399
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4666390.. 4669069
Download Sequence
A.thaliana
AGI-codeAT3G12220.1
Descriptionserine carboxypeptidase-like 16
TAIR curator summary
Alias[scpl16][serine carboxypeptidase-like 16]
Gene coexpression
MR
MR Locus Description
15.1658 Ahg488567 UDP-Glycosyltransferase superfamily protein
17.8326 Ahg357563 Homeodomain-like superfamily protein
41.4246 Ahg483061 TRICHOME BIREFRINGENCE-LIKE 28
44.3283 Ahg928947 serine carboxypeptidase-like 15
50.7937 Ahg315143 flavin-monooxygenase glucosinolate S-oxygenase 2
68.2788 Ahg472188 jasmonic acid carboxyl methyltransferase
74.3505 Ahg488622 HXXXD-type acyl-transferase family protein
82.4136 Ahg482636 proline transporter 3
90.2995 Ahg476459 serine carboxypeptidase-like 6
97.2111 Ahg939042 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression